==> CLUST_1.cm <== INFERNAL1/a [1.1.2 | July 2016] NAME CLUST_1 STATES 166 NODES 56 CLEN 54 W 131 ALPH RNA RF no CONS yes MAP yes DATE Wed Feb 7 22:46:35 2018 COM [1] cmbuild --noss -F selected_tracr_clust/CLUST_1.cm selected_tracr_clust/CLUST_1.aln PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 4 EFFN 3.933594 CKSUM 254451309 NULL 0.000 0.000 0.000 0.000 EFP7GF -11.9292 0.71907 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 131 212 -7.598 -7.805 -0.034 -6.219 IL 1 1 2 1 4 1 16 133 214 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 16 132 213 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 1 16 131 212 -5.939 -0.048 -5.939 1.854 -3.136 -2.837 -2.922 D 4 2 3 5 3 0 11 128 208 -11.551 -1.585 -0.585 IL 5 5 3 5 3 1 17 138 219 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - A - - - ML 6 5 3 8 3 1 15 130 210 -5.939 -0.048 -5.939 1.854 -3.136 -2.837 -2.922 D 7 5 3 8 3 0 10 126 207 -11.551 -1.585 -0.585 IL 8 8 3 8 3 1 17 136 218 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - G - - - ML 9 8 3 11 3 1 14 128 209 -5.939 -0.048 -5.939 -2.295 -3.270 1.835 -2.996 D 10 8 3 11 3 0 10 125 205 -11.551 -1.585 -0.585 IL 11 11 3 11 3 1 16 135 217 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - C - - - ML 12 11 3 14 3 1 14 127 207 -5.939 -0.048 -5.939 -2.674 1.787 -2.911 -1.942 D 13 11 3 14 3 0 9 124 204 -11.551 -1.585 -0.585 IL 14 14 3 14 3 1 15 134 215 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - C - - - ML 15 14 3 17 3 1 13 126 206 -5.939 -0.048 -5.939 -1.665 1.077 -1.866 0.379 D 16 14 3 17 3 0 8 122 203 -11.551 -1.585 -0.585 IL 17 17 3 17 3 1 15 132 214 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - G - - - ML 18 17 3 20 3 1 12 124 205 -5.939 -0.048 -5.939 -2.295 -3.270 1.835 -2.996 D 19 17 3 20 3 0 8 121 201 -11.551 -1.585 -0.585 IL 20 20 3 20 3 1 14 131 212 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - A - - - ML 21 20 3 23 3 1 12 123 203 -5.939 -0.048 -5.939 1.854 -3.136 -2.837 -2.922 D 22 20 3 23 3 0 7 120 200 -11.551 -1.585 -0.585 IL 23 23 3 23 3 1 13 130 211 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - g - - - ML 24 23 3 26 3 1 11 122 202 -5.939 -0.048 -5.939 0.643 -1.699 0.796 -1.341 D 25 23 3 26 3 0 6 118 198 -11.551 -1.585 -0.585 IL 26 26 3 26 3 1 13 129 209 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - A - - - ML 27 26 3 29 3 1 11 120 200 -5.939 -0.048 -5.939 1.854 -3.136 -2.837 -2.922 D 28 26 3 29 3 0 6 117 197 -11.551 -1.585 -0.585 IL 29 29 3 29 3 1 12 127 208 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - G - - - ML 30 29 3 32 3 1 10 119 199 -5.939 -0.048 -5.939 -2.295 -3.270 1.835 -2.996 D 31 29 3 32 3 0 5 116 195 -11.551 -1.585 -0.585 IL 32 32 3 32 3 1 11 126 207 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - A - - - ML 33 32 3 35 3 1 9 118 197 -5.939 -0.048 -5.939 1.854 -3.136 -2.837 -2.922 D 34 32 3 35 3 0 4 114 194 -11.551 -1.585 -0.585 IL 35 35 3 35 3 1 11 125 205 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - U - - - ML 36 35 3 38 3 1 9 116 196 -5.939 -0.048 -5.939 -2.413 -1.956 -2.600 1.761 D 37 35 3 38 3 0 4 113 192 -11.551 -1.585 -0.585 IL 38 38 3 38 3 1 10 123 204 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - G - - - ML 39 38 3 41 3 1 8 115 194 -5.939 -0.048 -5.939 -2.295 -3.270 1.835 -2.996 D 40 38 3 41 3 0 3 112 190 -11.551 -1.585 -0.585 IL 41 41 3 41 3 1 10 122 202 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - C - - - ML 42 41 3 44 3 1 8 114 193 -5.939 -0.048 -5.939 -2.674 1.787 -2.911 -1.942 D 43 41 3 44 3 0 3 110 189 -11.551 -1.585 -0.585 IL 44 44 3 44 3 1 9 121 201 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - g - - - ML 45 44 3 47 3 1 7 112 191 -1.683 -0.573 -5.939 0.643 -1.699 0.796 -1.341 D 46 44 3 47 3 0 2 108 186 -11.551 -1.585 -0.585 IL 47 47 3 47 3 1 8 114 193 -0.584 -1.587 -15.736 0.000 0.000 0.000 0.000 [ MATL 16 ] 19 - C - - - ML 48 47 3 50 3 1 6 110 188 -5.939 -0.048 -5.939 -2.674 1.787 -2.911 -1.942 D 49 47 3 50 3 0 2 106 185 -11.551 -1.585 -0.585 IL 50 50 3 50 3 1 8 117 196 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 20 - C - - - ML 51 50 3 53 3 1 6 108 187 -5.939 -0.048 -5.939 -2.674 1.787 -2.911 -1.942 D 52 50 3 53 3 0 1 105 183 -11.551 -1.585 -0.585 IL 53 53 3 53 3 1 7 115 195 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 18 ] 21 - A - - - ML 54 53 3 56 3 1 5 107 185 -5.939 -0.048 -5.939 1.854 -3.136 -2.837 -2.922 D 55 53 3 56 3 0 1 104 182 -11.551 -1.585 -0.585 IL 56 56 3 56 3 1 7 114 193 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 22 - A - - - ML 57 56 3 59 3 1 5 106 184 -5.939 -0.048 -5.939 1.854 -3.136 -2.837 -2.922 D 58 56 3 59 3 0 0 102 180 -11.551 -1.585 -0.585 IL 59 59 3 59 3 1 6 113 192 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 23 - A - - - ML 60 59 3 62 3 1 4 104 182 -5.939 -0.048 -5.939 1.854 -3.136 -2.837 -2.922 D 61 59 3 62 3 0 0 101 179 -11.551 -1.585 -0.585 IL 62 62 3 62 3 1 6 111 190 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 24 - U - - - ML 63 62 3 65 3 1 4 103 181 -5.939 -0.048 -5.939 -2.413 -1.956 -2.600 1.761 D 64 62 3 65 3 0 0 99 177 -11.551 -1.585 -0.585 IL 65 65 3 65 3 1 5 110 189 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 22 ] 25 - G - - - ML 66 65 3 68 3 1 3 101 179 -5.939 -0.048 -5.939 -2.295 -3.270 1.835 -2.996 D 67 65 3 68 3 0 0 98 176 -11.551 -1.585 -0.585 IL 68 68 3 68 3 1 5 109 187 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 26 - G - - - ML 69 68 3 71 3 1 3 100 178 -5.939 -0.048 -5.939 -2.295 -3.270 1.835 -2.996 D 70 68 3 71 3 0 0 97 174 -11.551 -1.585 -0.585 IL 71 71 3 71 3 1 4 107 186 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 27 - A - - - ML 72 71 3 74 3 1 3 99 176 -5.939 -0.048 -5.939 1.854 -3.136 -2.837 -2.922 D 73 71 3 74 3 0 0 95 172 -11.551 -1.585 -0.585 IL 74 74 3 74 3 1 4 106 184 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 28 - A - - - ML 75 74 3 77 3 1 2 97 174 -5.939 -0.048 -5.939 1.854 -3.136 -2.837 -2.922 D 76 74 3 77 3 0 0 94 171 -11.551 -1.585 -0.585 IL 77 77 3 77 3 1 3 105 183 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 29 - A - - - ML 78 77 3 80 3 1 2 96 173 -5.939 -0.048 -5.939 1.324 -1.803 -0.240 -1.464 D 79 77 3 80 3 0 0 92 169 -11.551 -1.585 -0.585 IL 80 80 3 80 3 1 3 103 181 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 30 - G - - - ML 81 80 3 83 3 1 2 94 171 -5.939 -0.048 -5.939 -2.295 -3.270 1.835 -2.996 D 82 80 3 83 3 0 0 91 168 -11.551 -1.585 -0.585 IL 83 83 3 83 3 1 3 102 180 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 31 - C - - - ML 84 83 3 86 3 1 1 93 170 -5.939 -0.048 -5.939 -1.516 1.242 -0.250 -1.169 D 85 83 3 86 3 0 0 90 166 -11.551 -1.585 -0.585 IL 86 86 3 86 3 1 2 101 178 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 32 - C - - - ML 87 86 3 89 3 1 1 92 168 -5.939 -0.048 -5.939 -2.674 1.787 -2.911 -1.942 D 88 86 3 89 3 0 0 88 164 -11.551 -1.585 -0.585 IL 89 89 3 89 3 1 2 99 177 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 33 - C - - - ML 90 89 3 92 3 1 1 90 166 -5.939 -0.048 -5.939 -2.674 1.787 -2.911 -1.942 D 91 89 3 92 3 0 0 87 163 -11.551 -1.585 -0.585 IL 92 92 3 92 3 1 2 98 175 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 34 - C - - - ML 93 92 3 95 3 1 1 89 165 -5.939 -0.048 -5.939 -1.516 1.242 -0.250 -1.169 D 94 92 3 95 3 0 0 85 161 -11.551 -1.585 -0.585 IL 95 95 3 95 3 1 2 96 173 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 35 - G - - - ML 96 95 3 98 3 1 1 87 163 -5.939 -0.048 -5.939 -1.335 -0.444 1.315 -1.397 D 97 95 3 98 3 0 0 84 159 -11.551 -1.585 -0.585 IL 98 98 3 98 3 1 1 95 172 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 33 ] 36 - C - - - ML 99 98 3 101 3 1 1 86 161 -5.939 -0.048 -5.939 -1.849 1.331 -2.065 -0.048 D 100 98 3 101 3 0 0 83 158 -11.551 -1.585 -0.585 IL 101 101 3 101 3 1 1 94 170 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 37 - A - - - ML 102 101 3 104 3 1 1 84 160 -5.939 -0.409 -2.117 1.854 -3.136 -2.837 -2.922 D 103 101 3 104 3 0 0 82 157 -11.551 -1.585 -0.585 IL 104 104 3 104 3 1 1 92 169 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 38 - g - - - ML 105 104 3 107 3 1 1 83 158 -5.591 -0.061 -5.591 -0.917 -0.052 0.956 -0.821 D 106 104 3 107 3 0 0 81 156 -13.978 -0.191 -3.013 IL 107 107 3 107 3 1 1 91 167 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 36 ] 39 - U - - - ML 108 107 3 110 3 1 1 81 156 -5.939 -0.048 -5.939 -0.174 -1.250 -1.405 1.211 D 109 107 3 110 3 0 0 78 152 -11.551 -1.585 -0.585 IL 110 110 3 110 3 1 1 89 165 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 37 ] 40 - G - - - ML 111 110 3 113 3 1 1 80 154 -5.939 -0.048 -5.939 -1.287 -1.692 1.315 -0.334 D 112 110 3 113 3 0 0 76 151 -11.551 -1.585 -0.585 IL 113 113 3 113 3 1 1 88 164 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 41 - C - - - ML 114 113 3 116 3 1 1 78 153 -5.939 -0.048 -5.939 -1.516 1.242 -0.250 -1.169 D 115 113 3 116 3 0 0 75 149 -11.551 -1.585 -0.585 IL 116 116 3 116 3 1 1 87 162 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 42 - G - - - ML 117 116 3 119 3 1 1 77 151 -5.939 -0.048 -5.939 -1.335 -0.444 1.315 -1.397 D 118 116 3 119 3 0 0 73 147 -11.551 -1.585 -0.585 IL 119 119 3 119 3 1 1 85 160 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 43 - G - - - ML 120 119 3 122 3 1 1 75 149 -5.939 -0.048 -5.939 -2.295 -3.270 1.835 -2.996 D 121 119 3 122 3 0 0 71 145 -11.551 -1.585 -0.585 IL 122 122 3 122 3 1 1 84 159 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 41 ] 44 - G - - - ML 123 122 3 125 3 1 1 73 147 -5.939 -0.048 -5.939 -2.295 -3.270 1.835 -2.996 D 124 122 3 125 3 0 0 70 143 -11.551 -1.585 -0.585 IL 125 125 3 125 3 1 1 82 157 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 45 - G - - - ML 126 125 3 128 3 1 1 72 145 -5.939 -0.048 -5.939 -1.335 -0.444 1.315 -1.397 D 127 125 3 128 3 0 0 68 141 -11.551 -1.585 -0.585 IL 128 128 3 128 3 1 1 81 155 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 46 - C - - - ML 129 128 3 131 3 1 1 70 143 -5.939 -0.048 -5.939 -2.674 1.787 -2.911 -1.942 D 130 128 3 131 3 0 0 66 139 -11.551 -1.585 -0.585 IL 131 131 3 131 3 1 1 79 153 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 47 - U - - - ML 132 131 3 134 3 1 1 68 141 -5.939 -0.048 -5.939 -1.650 -0.233 -1.847 1.352 D 133 131 3 134 3 0 0 65 137 -11.551 -1.585 -0.585 IL 134 134 3 134 3 1 1 78 151 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 48 - U - - - ML 135 134 3 137 3 1 1 67 139 -5.939 -0.048 -5.939 -2.413 -1.956 -2.600 1.761 D 136 134 3 137 3 0 0 63 135 -11.551 -1.585 -0.585 IL 137 137 3 137 3 1 1 76 149 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 49 - U - - - ML 138 137 3 140 3 1 1 65 137 -5.939 -0.048 -5.939 -2.413 -1.956 -2.600 1.761 D 139 137 3 140 3 0 0 61 132 -11.551 -1.585 -0.585 IL 140 140 3 140 3 1 1 74 147 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 47 ] 50 - C - - - ML 141 140 3 143 3 1 1 63 135 -5.939 -0.048 -5.939 -2.674 1.787 -2.911 -1.942 D 142 140 3 143 3 0 0 59 130 -11.551 -1.585 -0.585 IL 143 143 3 143 3 1 1 73 145 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 51 - G - - - ML 144 143 3 146 3 1 1 61 133 -5.939 -0.048 -5.939 -2.295 -3.270 1.835 -2.996 D 145 143 3 146 3 0 0 57 128 -11.551 -1.585 -0.585 IL 146 146 3 146 3 1 1 71 143 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 52 - U - - - ML 147 146 3 149 3 1 1 59 130 -5.939 -0.048 -5.939 -2.413 -1.956 -2.600 1.761 D 148 146 3 149 3 0 0 54 125 -11.551 -1.585 -0.585 IL 149 149 3 149 3 1 1 69 141 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 50 ] 53 - C - - - ML 150 149 3 152 3 1 1 57 128 -5.939 -0.048 -5.939 -2.674 1.787 -2.911 -1.942 D 151 149 3 152 3 0 0 52 122 -11.551 -1.585 -0.585 IL 152 152 3 152 3 1 1 68 139 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 51 ] 54 - u - - - ML 153 152 3 155 3 1 1 54 125 -5.939 -0.048 -5.939 0.519 -1.146 -1.208 0.750 D 154 152 3 155 3 0 0 48 118 -11.551 -1.585 -0.585 IL 155 155 3 155 3 1 1 66 137 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 52 ] 55 - U - - - ML 156 155 3 158 3 1 1 52 121 -5.939 -0.048 -5.939 -2.413 -1.956 -2.600 1.761 D 157 155 3 158 3 0 0 44 113 -11.551 -1.585 -0.585 IL 158 158 3 158 3 1 1 64 134 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 53 ] 56 - U - - - ML 159 158 3 161 3 1 1 48 117 -5.939 -0.048 -5.939 -2.413 -1.956 -2.600 1.761 D 160 158 3 161 3 0 0 32 101 -11.551 -1.585 -0.585 IL 161 161 3 161 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 54 ] 57 - U - - - ML 162 161 3 164 2 1 1 1 1 * 0.000 -2.413 -1.956 -2.600 1.761 D 163 161 3 164 2 0 0 0 0 * 0.000 IL 164 164 3 164 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 55 ] - - - - - - E 165 164 3 -1 0 0 0 0 0 // HMMER3/f [3.1b3 | July 2016] NAME CLUST_1 LENG 54 MAXL 131 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Wed Feb 7 22:46:35 2018 COM [1] cmbuild --noss -F selected_tracr_clust/CLUST_1.cm selected_tracr_clust/CLUST_1.aln COM [2] cmbuild --noss -F selected_tracr_clust/CLUST_1.cm selected_tracr_clust/CLUST_1.aln NSEQ 4 EFFN 3.933594 STATS LOCAL MSV -7.4571 0.71907 STATS LOCAL VITERBI -8.1549 0.71907 STATS LOCAL FORWARD -3.7869 0.71907 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.33796 1.39982 1.29343 1.52947 1.38629 1.38629 1.38629 1.38629 0.01917 5.26651 4.28133 0.39730 1.11515 0.00000 * 1 0.10139 3.55996 3.35259 3.41177 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 2 0.10139 3.55996 3.35259 3.41177 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 3 2.97675 3.65301 0.11453 3.46282 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 4 3.23991 0.14786 3.40420 2.73263 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 5 2.54019 0.63980 2.67954 1.12345 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 6 2.97675 3.65301 0.11453 3.46282 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 7 0.10139 3.55996 3.35259 3.41177 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 8 0.94088 2.56363 0.83469 2.31585 - g - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 9 0.10139 3.55996 3.35259 3.41177 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 10 2.97675 3.65301 0.11453 3.46282 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 11 0.10139 3.55996 3.35259 3.41177 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 12 3.05897 2.74231 3.18830 0.16558 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 13 2.97675 3.65301 0.11453 3.46282 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 14 3.23991 0.14786 3.40420 2.73263 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 15 0.94088 2.56363 0.83469 2.31585 - g - - : 1.38629 1.38629 1.38629 1.38629 0.39711 1.16657 4.11637 1.10008 0.40473 1.09861 0.40547 16 3.23991 0.14786 3.40420 2.73263 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 17 3.23991 0.14786 3.40420 2.73263 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 18 0.10139 3.55996 3.35259 3.41177 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 19 0.10139 3.55996 3.35259 3.41177 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 20 0.10139 3.55996 3.35259 3.41177 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 21 3.05897 2.74231 3.18830 0.16558 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 22 2.97675 3.65301 0.11453 3.46282 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 23 2.97675 3.65301 0.11453 3.46282 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 24 0.10139 3.55996 3.35259 3.41177 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 25 0.10139 3.55996 3.35259 3.41177 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 26 0.46826 2.63635 1.55272 2.40112 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 27 2.97675 3.65301 0.11453 3.46282 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 28 2.43711 0.52554 1.55974 2.19680 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 29 3.23991 0.14786 3.40420 2.73263 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 30 3.23991 0.14786 3.40420 2.73263 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 31 2.43711 0.52554 1.55974 2.19680 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 32 2.31184 1.69375 0.47460 2.35433 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 33 2.66825 0.46367 2.81731 1.41928 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 34 0.10139 3.55996 3.35259 3.41177 - A - - : 1.38629 1.38629 1.38629 1.38629 0.28349 4.11637 1.46732 1.46634 0.26236 1.09861 0.40547 35 2.02172 1.42225 0.72392 1.95508 - g - - : 1.38629 1.38629 1.38629 1.38629 0.04238 3.87526 3.87526 1.46634 0.26236 0.13229 2.08819 36 1.50668 2.25252 2.36011 0.54678 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 37 2.27823 2.55941 0.47501 1.61795 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 38 2.43711 0.52554 1.55974 2.19680 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 39 2.31184 1.69375 0.47460 2.35433 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 40 2.97675 3.65301 0.11453 3.46282 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 41 2.97675 3.65301 0.11453 3.46282 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 42 2.31184 1.69375 0.47460 2.35433 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 43 3.23991 0.14786 3.40420 2.73263 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 44 2.53013 1.54776 2.66687 0.44917 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 45 3.05897 2.74231 3.18830 0.16558 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 46 3.05897 2.74231 3.18830 0.16558 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 47 3.23991 0.14786 3.40420 2.73263 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 48 2.97675 3.65301 0.11453 3.46282 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 49 3.05897 2.74231 3.18830 0.16558 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 50 3.23991 0.14786 3.40420 2.73263 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 51 1.02664 2.18052 2.22330 0.86617 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 52 3.05897 2.74231 3.18830 0.16558 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 53 3.05897 2.74231 3.18830 0.16558 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03315 4.11637 4.11637 1.46634 0.26236 1.09861 0.40547 54 3.05897 2.74231 3.18830 0.16558 - U - - : 1.38629 1.38629 1.38629 1.38629 * 0.00000 * 0.45905 0.99935 0.00000 * // ==> CLUST_14.cm <== INFERNAL1/a [1.1.2 | July 2016] NAME CLUST_14 STATES 142 NODES 48 CLEN 46 W 117 ALPH RNA RF no CONS yes MAP yes DATE Wed Feb 7 22:46:36 2018 COM [1] cmbuild --noss -F selected_tracr_clust/CLUST_14.cm selected_tracr_clust/CLUST_14.aln PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 5 EFFN 5.000000 CKSUM 3230916328 NULL 0.000 0.000 0.000 0.000 EFP7GF -11.0052 0.72089 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 117 195 -7.853 -8.060 -0.028 -6.474 IL 1 1 2 1 4 1 9 119 198 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 9 118 197 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 1 9 117 196 -6.170 -0.041 -6.170 1.904 -3.738 -3.372 -3.544 D 4 2 3 5 3 0 4 114 192 -11.551 -1.585 -0.585 IL 5 5 3 5 3 1 11 124 204 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - A - - - ML 6 5 3 8 3 1 9 116 194 -6.170 -0.041 -6.170 1.904 -3.738 -3.372 -3.544 D 7 5 3 8 3 0 3 113 191 -11.551 -1.585 -0.585 IL 8 8 3 8 3 1 10 123 202 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - G - - - ML 9 8 3 11 3 1 8 114 193 -6.170 -0.041 -6.170 -2.637 -3.732 1.877 -3.461 D 10 8 3 11 3 0 3 111 189 -11.551 -1.585 -0.585 IL 11 11 3 11 3 1 9 122 201 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - G - - - ML 12 11 3 14 3 1 7 113 191 -6.170 -0.041 -6.170 0.378 -2.164 1.132 -1.810 D 13 11 3 14 3 0 2 110 188 -11.551 -1.585 -0.585 IL 14 14 3 14 3 1 9 120 200 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - C - - - ML 15 14 3 17 3 1 7 112 190 -6.170 -0.041 -6.170 -3.122 1.844 -3.376 -2.335 D 16 14 3 17 3 0 1 109 186 -11.551 -1.585 -0.585 IL 17 17 3 17 3 1 8 119 198 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - A - - - ML 18 17 3 20 3 1 6 110 188 -6.170 -0.041 -6.170 1.904 -3.738 -3.372 -3.544 D 19 17 3 20 3 0 1 107 185 -11.551 -1.585 -0.585 IL 20 20 3 20 3 1 7 118 197 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - A - - - ML 21 20 3 23 3 1 5 109 187 -6.170 -0.041 -6.170 1.904 -3.738 -3.372 -3.544 D 22 20 3 23 3 0 0 106 184 -11.551 -1.585 -0.585 IL 23 23 3 23 3 1 7 116 195 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - u - - - ML 24 23 3 26 3 1 5 108 185 -6.170 -0.041 -6.170 0.370 -1.382 -1.483 0.975 D 25 23 3 26 3 0 0 105 182 -11.551 -1.585 -0.585 IL 26 26 3 26 3 1 6 115 194 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - A - - - ML 27 26 3 29 3 1 4 106 184 -6.170 -0.041 -6.170 1.904 -3.738 -3.372 -3.544 D 28 26 3 29 3 0 0 103 181 -11.551 -1.585 -0.585 IL 29 29 3 29 3 1 6 114 192 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - U - - - ML 30 29 3 32 3 1 4 105 182 -6.170 -0.041 -6.170 -2.901 -2.363 -3.099 1.830 D 31 29 3 32 3 0 0 102 179 -11.551 -1.585 -0.585 IL 32 32 3 32 3 1 5 113 191 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - G - - - ML 33 32 3 35 3 1 3 104 181 -6.170 -0.041 -6.170 -2.637 -3.732 1.877 -3.461 D 34 32 3 35 3 0 0 101 178 -11.551 -1.585 -0.585 IL 35 35 3 35 3 1 5 111 189 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - c - - - ML 36 35 3 38 3 1 3 102 179 -6.170 -0.041 -6.170 -1.937 0.977 -2.145 0.627 D 37 35 3 38 3 0 0 99 176 -11.551 -1.585 -0.585 IL 38 38 3 38 3 1 4 110 188 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - C - - - ML 39 38 3 41 3 1 2 101 178 -6.170 -0.041 -6.170 -3.122 1.844 -3.376 -2.335 D 40 38 3 41 3 0 0 98 174 -11.551 -1.585 -0.585 IL 41 41 3 41 3 1 4 109 187 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - G - - - ML 42 41 3 44 3 1 2 100 176 -6.170 -0.041 -6.170 -2.637 -3.732 1.877 -3.461 D 43 41 3 44 3 0 0 96 173 -11.551 -1.585 -0.585 IL 44 44 3 44 3 1 3 107 185 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - U - - - ML 45 44 3 47 3 1 2 98 175 -6.170 -0.041 -6.170 -2.901 -2.363 -3.099 1.830 D 46 44 3 47 3 0 0 95 171 -11.551 -1.585 -0.585 IL 47 47 3 47 3 1 3 106 184 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - G - - - ML 48 47 3 50 3 1 1 97 173 -6.170 -0.041 -6.170 -2.637 -3.732 1.877 -3.461 D 49 47 3 50 3 0 0 94 170 -11.551 -1.585 -0.585 IL 50 50 3 50 3 1 2 105 182 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - U - - - ML 51 50 3 53 3 1 1 96 172 -6.170 -0.041 -6.170 -2.901 -2.363 -3.099 1.830 D 52 50 3 53 3 0 0 92 168 -11.551 -1.585 -0.585 IL 53 53 3 53 3 1 2 103 181 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - U - - - ML 54 53 3 56 3 1 1 94 170 -6.170 -0.041 -6.170 -2.901 -2.363 -3.099 1.830 D 55 53 3 56 3 0 0 91 167 -11.551 -1.585 -0.585 IL 56 56 3 56 3 1 2 102 179 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - U - - - ML 57 56 3 59 3 1 1 93 169 -6.170 -0.041 -6.170 -2.901 -2.363 -3.099 1.830 D 58 56 3 59 3 0 0 89 165 -11.551 -1.585 -0.585 IL 59 59 3 59 3 1 1 101 178 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 20 - A - - - ML 60 59 3 62 3 1 1 91 167 -6.170 -0.041 -6.170 1.904 -3.738 -3.372 -3.544 D 61 59 3 62 3 0 0 88 163 -11.551 -1.585 -0.585 IL 62 62 3 62 3 1 1 99 176 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 21 - U - - - ML 63 62 3 65 3 1 1 90 165 -6.170 -0.041 -6.170 -2.901 -2.363 -3.099 1.830 D 64 62 3 65 3 0 0 87 162 -11.551 -1.585 -0.585 IL 65 65 3 65 3 1 1 98 174 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 22 ] 22 - C - - - ML 66 65 3 68 3 1 1 89 164 -6.170 -0.041 -6.170 -3.122 1.844 -3.376 -2.335 D 67 65 3 68 3 0 0 85 160 -11.551 -1.585 -0.585 IL 68 68 3 68 3 1 1 97 173 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 23 - u - - - ML 69 68 3 71 3 1 1 87 162 -6.170 -0.041 -6.170 -1.867 0.591 -2.070 0.986 D 70 68 3 71 3 0 0 84 159 -11.551 -1.585 -0.585 IL 71 71 3 71 3 1 1 95 171 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 24 - C - - - ML 72 71 3 74 3 1 1 86 161 -6.170 -0.041 -6.170 -3.122 1.844 -3.376 -2.335 D 73 71 3 74 3 0 0 82 157 -11.551 -1.585 -0.585 IL 74 74 3 74 3 1 1 94 170 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 25 - G - - - ML 75 74 3 77 3 1 1 84 159 -6.170 -0.041 -6.170 -0.410 -2.597 1.522 -2.255 D 76 74 3 77 3 0 0 81 155 -11.551 -1.585 -0.585 IL 77 77 3 77 3 1 1 92 168 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 26 - U - - - ML 78 77 3 80 3 1 1 83 157 -6.170 -0.041 -6.170 -1.948 -0.046 -2.155 1.349 D 79 77 3 80 3 0 0 79 154 -11.551 -1.585 -0.585 IL 80 80 3 80 3 1 1 91 167 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 27 - C - - - ML 81 80 3 83 3 1 1 81 156 -6.170 -0.041 -6.170 -2.202 1.383 -2.432 -0.016 D 82 80 3 83 3 0 0 78 152 -11.551 -1.585 -0.585 IL 83 83 3 83 3 1 1 90 165 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 28 - A - - - ML 84 83 3 86 3 1 1 80 154 -6.170 -0.041 -6.170 1.904 -3.738 -3.372 -3.544 D 85 83 3 86 3 0 0 76 150 -11.551 -1.585 -0.585 IL 86 86 3 86 3 1 1 88 163 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 29 - A - - - ML 87 86 3 89 3 1 1 78 152 -6.170 -0.041 -6.170 1.904 -3.738 -3.372 -3.544 D 88 86 3 89 3 0 0 75 148 -11.551 -1.585 -0.585 IL 89 89 3 89 3 1 1 87 162 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 30 - U - - - ML 90 89 3 92 3 1 1 77 150 -6.170 -0.041 -6.170 -1.868 0.470 -2.070 1.072 D 91 89 3 92 3 0 0 73 147 -11.551 -1.585 -0.585 IL 92 92 3 92 3 1 1 85 160 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 31 - U - - - ML 93 92 3 95 3 1 1 75 149 -6.170 -0.041 -6.170 -1.948 -0.046 -2.155 1.349 D 94 92 3 95 3 0 0 72 145 -11.551 -1.585 -0.585 IL 95 95 3 95 3 1 1 84 158 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 32 - U - - - ML 96 95 3 98 3 1 1 74 147 -6.170 -0.041 -6.170 -1.500 -1.523 -0.224 1.288 D 97 95 3 98 3 0 0 70 143 -11.551 -1.585 -0.585 IL 98 98 3 98 3 1 1 83 157 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 33 ] 33 - g - - - ML 99 98 3 101 3 1 1 72 145 -6.170 -0.041 -6.170 0.368 -1.152 0.385 -0.069 D 100 98 3 101 3 0 0 68 141 -11.551 -1.585 -0.585 IL 101 101 3 101 3 1 1 81 155 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 34 - U - - - ML 102 101 3 104 3 1 1 70 143 -6.170 -0.041 -6.170 -0.191 -1.501 -1.686 1.299 D 103 101 3 104 3 0 0 67 139 -11.551 -1.585 -0.585 IL 104 104 3 104 3 1 1 80 153 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 35 - U - - - ML 105 104 3 107 3 1 1 69 141 -1.788 -0.522 -6.170 -2.901 -2.363 -3.099 1.830 D 106 104 3 107 3 0 0 65 138 -11.551 -1.585 -0.585 IL 107 107 3 107 3 1 1 68 141 -6.652 -0.014 -14.296 0.000 0.000 0.000 0.000 [ MATL 36 ] 37 - G - - - ML 108 107 3 110 3 1 1 67 140 -6.170 -0.041 -6.170 -0.306 -2.541 1.486 -2.197 D 109 107 3 110 3 0 0 64 136 -11.551 -1.585 -0.585 IL 110 110 3 110 3 1 1 77 150 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 37 ] 38 - G - - - ML 111 110 3 113 3 1 1 66 138 -6.170 -0.041 -6.170 -2.637 -3.732 1.877 -3.461 D 112 110 3 113 3 0 0 62 134 -11.551 -1.585 -0.585 IL 113 113 3 113 3 1 1 75 148 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 39 - c - - - ML 114 113 3 116 3 1 1 64 136 -6.170 -0.041 -6.170 -1.937 0.977 -2.145 0.627 D 115 113 3 116 3 0 0 60 131 -11.551 -1.585 -0.585 IL 116 116 3 116 3 1 1 74 146 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 40 - G - - - ML 117 116 3 119 3 1 1 62 134 -6.170 -0.041 -6.170 -2.637 -3.732 1.877 -3.461 D 118 116 3 119 3 0 0 58 129 -11.551 -1.585 -0.585 IL 119 119 3 119 3 1 1 72 145 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 41 - a - - - ML 120 119 3 122 3 1 1 60 131 -6.170 -0.041 -6.170 0.825 -1.986 0.725 -1.631 D 121 119 3 122 3 0 0 56 127 -11.551 -1.585 -0.585 IL 122 122 3 122 3 1 1 71 143 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 41 ] 42 - G - - - ML 123 122 3 125 3 1 1 58 129 -6.170 -0.041 -6.170 -2.637 -3.732 1.877 -3.461 D 124 122 3 125 3 0 0 54 124 -11.551 -1.585 -0.585 IL 125 125 3 125 3 1 1 69 141 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 43 - A - - - ML 126 125 3 128 3 1 1 56 127 -6.170 -0.041 -6.170 1.904 -3.738 -3.372 -3.544 D 127 125 3 128 3 0 0 51 121 -11.551 -1.585 -0.585 IL 128 128 3 128 3 1 1 67 138 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 44 - U - - - ML 129 128 3 131 3 1 1 54 124 -6.170 -0.041 -6.170 -2.901 -2.363 -3.099 1.830 D 130 128 3 131 3 0 0 48 117 -11.551 -1.585 -0.585 IL 131 131 3 131 3 1 1 66 136 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 45 - U - - - ML 132 131 3 134 3 1 1 51 121 -6.170 -0.041 -6.170 -2.901 -2.363 -3.099 1.830 D 133 131 3 134 3 0 0 43 113 -11.551 -1.585 -0.585 IL 134 134 3 134 3 1 1 64 134 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 46 - U - - - ML 135 134 3 137 3 1 1 47 116 -6.170 -0.041 -6.170 -2.901 -2.363 -3.099 1.830 D 136 134 3 137 3 0 0 32 101 -11.551 -1.585 -0.585 IL 137 137 3 137 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 47 - U - - - ML 138 137 3 140 2 1 1 1 1 * 0.000 -2.901 -2.363 -3.099 1.830 D 139 137 3 140 2 0 0 0 0 * 0.000 IL 140 140 3 140 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 47 ] - - - - - - E 141 140 3 -1 0 0 0 0 0 // HMMER3/f [3.1b3 | July 2016] NAME CLUST_14 LENG 46 MAXL 117 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Wed Feb 7 22:46:36 2018 COM [1] cmbuild --noss -F selected_tracr_clust/CLUST_14.cm selected_tracr_clust/CLUST_14.aln COM [2] cmbuild --noss -F selected_tracr_clust/CLUST_14.cm selected_tracr_clust/CLUST_14.aln NSEQ 5 EFFN 5.000000 STATS LOCAL MSV -7.2692 0.72089 STATS LOCAL VITERBI -7.7398 0.72089 STATS LOCAL FORWARD -3.5716 0.72089 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.36419 1.72746 1.46536 1.09160 1.38629 1.38629 1.38629 1.38629 0.01604 5.44299 4.45782 0.39730 1.11515 0.00000 * 1 0.06648 3.97700 3.72374 3.84293 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 2 0.06648 3.97700 3.72374 3.84293 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 3 3.21442 3.97314 0.08523 3.78506 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 4 1.12436 2.88624 0.60141 2.64063 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 5 3.55029 0.10797 3.72605 3.00490 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 6 0.06648 3.97700 3.72374 3.84293 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 7 0.06648 3.97700 3.72374 3.84293 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 8 1.12986 2.34433 2.41404 0.71018 - u - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 9 0.06648 3.97700 3.72374 3.84293 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 10 3.39709 3.02431 3.53405 0.11794 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 11 3.21442 3.97314 0.08523 3.78506 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 12 2.72888 0.70897 2.87309 0.95184 - c - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 13 3.55029 0.10797 3.72605 3.00490 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 14 3.21442 3.97314 0.08523 3.78506 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 15 3.39709 3.02431 3.53405 0.11794 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 16 3.21442 3.97314 0.08523 3.78506 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 17 3.39709 3.02431 3.53405 0.11794 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 18 3.39709 3.02431 3.53405 0.11794 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 19 3.39709 3.02431 3.53405 0.11794 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 20 0.06648 3.97700 3.72374 3.84293 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 21 3.39709 3.02431 3.53405 0.11794 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 22 3.55029 0.10797 3.72605 3.00490 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 23 2.68045 0.97638 2.82091 0.70271 - u - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 24 3.55029 0.10797 3.72605 3.00490 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 25 1.67063 3.18606 0.33108 2.94906 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 26 2.73626 1.41790 2.87995 0.45126 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 27 2.91255 0.42755 3.07174 1.39748 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 28 0.06648 3.97700 3.72374 3.84293 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 29 0.06648 3.97700 3.72374 3.84293 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 30 2.68084 1.06045 2.82123 0.64310 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 31 2.73626 1.41790 2.87995 0.45126 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 32 2.42599 2.44195 1.54174 0.49330 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 33 1.13096 2.18490 1.11955 1.43397 - g - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 34 1.51875 2.42667 2.55485 0.48616 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 35 3.39709 3.02431 3.53405 0.11794 - U - - : 1.38629 1.38629 1.38629 1.38629 0.36162 1.23939 4.27667 0.01000 4.61058 1.09861 0.40547 36 1.59866 3.14745 0.35620 2.90889 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 37 3.21442 3.97314 0.08523 3.78506 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 38 2.72888 0.70897 2.87309 0.95184 - c - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 39 3.21442 3.97314 0.08523 3.78506 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 40 0.81455 2.76321 0.88343 2.51689 - a - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 41 3.21442 3.97314 0.08523 3.78506 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 42 0.06648 3.97700 3.72374 3.84293 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 43 3.39709 3.02431 3.53405 0.11794 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 44 3.39709 3.02431 3.53405 0.11794 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 45 3.39709 3.02431 3.53405 0.11794 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 46 3.39709 3.02431 3.53405 0.11794 - U - - : 1.38629 1.38629 1.38629 1.38629 * 0.00000 * 0.45905 0.99935 0.00000 * // ==> CLUST_15.cm <== INFERNAL1/a [1.1.2 | July 2016] NAME CLUST_15 STATES 160 NODES 54 CLEN 52 W 122 ALPH RNA RF no CONS yes MAP yes DATE Wed Feb 7 22:46:36 2018 COM [1] cmbuild --noss -F selected_tracr_clust/CLUST_15.cm selected_tracr_clust/CLUST_15.aln PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 9 EFFN 5.893066 CKSUM 1061394817 NULL 0.000 0.000 0.000 0.000 EFP7GF -12.8803 0.71913 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 122 201 -8.036 -8.243 -0.025 -6.657 IL 1 1 2 1 4 1 17 125 203 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 16 124 203 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 14 - a - - - ML 3 2 3 5 3 1 16 123 202 -6.339 -0.036 -6.339 0.899 -1.567 -1.665 0.568 D 4 2 3 5 3 0 12 120 198 -11.551 -1.585 -0.585 IL 5 5 3 5 3 1 17 130 210 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 15 - a - - - ML 6 5 3 8 3 1 15 121 200 -6.339 -0.036 -6.339 0.899 -1.567 -1.665 0.568 D 7 5 3 8 3 0 11 118 197 -11.551 -1.585 -0.585 IL 8 8 3 8 3 1 16 129 208 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 16 - G - - - ML 9 8 3 11 3 1 14 120 199 -6.339 -0.036 -6.339 0.393 -2.434 1.180 -2.082 D 10 8 3 11 3 0 11 117 196 -11.551 -1.585 -0.585 IL 11 11 3 11 3 1 15 127 207 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 17 - G - - - ML 12 11 3 14 3 1 13 119 197 -6.339 -0.036 -6.339 0.393 -2.434 1.180 -2.082 D 13 11 3 14 3 0 10 116 195 -11.551 -1.585 -0.585 IL 14 14 3 14 3 1 14 126 206 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 18 - u - - - ML 15 14 3 17 3 1 12 118 196 -6.339 -0.519 -1.788 -2.151 0.792 -2.364 0.887 D 16 14 3 17 3 0 10 116 194 -11.551 -1.585 -0.585 IL 17 17 3 17 3 1 14 125 205 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 19 - c - - - ML 18 17 3 20 3 1 12 117 195 -5.870 -0.050 -5.870 -0.261 0.851 -1.167 -0.125 D 19 17 3 20 3 0 10 115 193 -14.635 -0.118 -3.669 IL 20 20 3 20 3 1 13 124 203 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 20 - U - - - ML 21 20 3 23 3 1 11 115 193 -6.339 -0.036 -6.339 -2.135 0.608 -2.347 1.037 D 22 20 3 23 3 0 6 112 190 -11.551 -1.585 -0.585 IL 23 23 3 23 3 1 13 123 202 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 21 - A - - - ML 24 23 3 26 3 1 11 114 192 -6.339 -0.036 -6.339 1.321 -1.769 -1.906 -0.087 D 25 23 3 26 3 0 6 111 189 -11.551 -1.585 -0.585 IL 26 26 3 26 3 1 12 121 200 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 22 - G - - - ML 27 26 3 29 3 1 10 113 190 -6.339 -0.036 -6.339 -0.964 -3.105 1.689 -2.778 D 28 26 3 29 3 0 5 110 187 -11.551 -1.585 -0.585 IL 29 29 3 29 3 1 11 120 199 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 23 - U - - - ML 30 29 3 32 3 1 10 111 189 -6.339 -0.036 -6.339 -3.247 -2.658 -3.450 1.866 D 31 29 3 32 3 0 4 108 186 -11.551 -1.585 -0.585 IL 32 32 3 32 3 1 11 119 197 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 24 - C - - - ML 33 32 3 35 3 1 9 110 188 -6.339 -0.036 -6.339 -3.423 1.874 -3.684 -2.607 D 34 32 3 35 3 0 4 107 184 -11.551 -1.585 -0.585 IL 35 35 3 35 3 1 10 118 196 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 12 ] 25 - C - - - ML 36 35 3 38 3 1 8 109 186 -6.339 -0.036 -6.339 -3.423 1.874 -3.684 -2.607 D 37 35 3 38 3 0 3 106 183 -11.551 -1.585 -0.585 IL 38 38 3 38 3 1 10 116 195 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 26 - G - - - ML 39 38 3 41 3 1 8 107 185 -6.339 -0.036 -6.339 -2.884 -4.049 1.900 -3.778 D 40 38 3 41 3 0 3 104 181 -11.551 -1.585 -0.585 IL 41 41 3 41 3 1 9 115 193 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 27 - U - - - ML 42 41 3 44 3 1 7 106 183 -6.339 -0.036 -6.339 -3.247 -2.658 -3.450 1.866 D 43 41 3 44 3 0 2 103 180 -11.551 -1.585 -0.585 IL 44 44 3 44 3 1 9 114 192 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 28 - A - - - ML 45 44 3 47 3 1 7 105 182 -6.339 -0.036 -6.339 1.180 -1.668 -1.783 0.175 D 46 44 3 47 3 0 1 102 178 -11.551 -1.585 -0.585 IL 47 47 3 47 3 1 8 112 190 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 29 - a - - - ML 48 47 3 50 3 1 6 103 180 -6.339 -0.036 -6.339 0.347 0.318 -1.274 0.094 D 49 47 3 50 3 0 1 100 177 -11.551 -1.585 -0.585 IL 50 50 3 50 3 1 7 111 189 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 30 - u - - - ML 51 50 3 53 3 1 6 102 179 -6.339 -0.036 -6.339 0.353 -0.217 -1.245 0.526 D 52 50 3 53 3 0 0 99 175 -11.551 -1.585 -0.585 IL 53 53 3 53 3 1 7 110 188 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 18 ] 31 - C - - - ML 54 53 3 56 3 1 5 101 177 -6.339 -0.036 -6.339 -3.423 1.874 -3.684 -2.607 D 55 53 3 56 3 0 0 98 174 -11.551 -1.585 -0.585 IL 56 56 3 56 3 1 6 109 186 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 32 - A - - - ML 57 56 3 59 3 1 5 99 176 -6.339 -0.036 -6.339 1.928 -4.156 -3.726 -3.975 D 58 56 3 59 3 0 0 96 172 -11.551 -1.585 -0.585 IL 59 59 3 59 3 1 6 107 185 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 33 - A - - - ML 60 59 3 62 3 1 4 98 174 -6.339 -0.036 -6.339 1.566 -2.622 -0.569 -2.298 D 61 59 3 62 3 0 0 95 171 -11.551 -1.585 -0.585 IL 62 62 3 62 3 1 5 106 183 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 34 - C - - - ML 63 62 3 65 3 1 4 97 173 -6.339 -0.036 -6.339 -3.423 1.874 -3.684 -2.607 D 64 62 3 65 3 0 0 94 169 -11.551 -1.585 -0.585 IL 65 65 3 65 3 1 5 105 182 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 22 ] 35 - U - - - ML 66 65 3 68 3 1 3 95 171 -6.339 -0.036 -6.339 -3.247 -2.658 -3.450 1.866 D 67 65 3 68 3 0 0 92 168 -11.551 -1.585 -0.585 IL 68 68 3 68 3 1 4 103 180 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 36 - U - - - ML 69 68 3 71 3 1 3 94 170 -6.339 -0.036 -6.339 -3.247 -2.658 -3.450 1.866 D 70 68 3 71 3 0 0 91 166 -11.551 -1.585 -0.585 IL 71 71 3 71 3 1 4 102 179 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 37 - G - - - ML 72 71 3 74 3 1 2 93 168 -6.339 -0.036 -6.339 -2.884 -4.049 1.900 -3.778 D 73 71 3 74 3 0 0 89 165 -11.551 -1.585 -0.585 IL 74 74 3 74 3 1 3 101 177 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 38 - A - - - ML 75 74 3 77 3 1 2 91 167 -6.339 -0.036 -6.339 1.564 -2.088 -2.280 -0.729 D 76 74 3 77 3 0 0 88 163 -11.551 -1.585 -0.585 IL 77 77 3 77 3 1 3 99 176 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 39 - A - - - ML 78 77 3 80 3 1 2 90 165 -6.339 -0.036 -6.339 1.928 -4.156 -3.726 -3.975 D 79 77 3 80 3 0 0 87 162 -11.551 -1.585 -0.585 IL 80 80 3 80 3 1 3 98 174 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 40 - A - - - ML 81 80 3 83 3 1 1 89 164 -6.339 -0.036 -6.339 1.928 -4.156 -3.726 -3.975 D 82 80 3 83 3 0 0 85 160 -11.551 -1.585 -0.585 IL 83 83 3 83 3 1 2 97 173 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 41 - A - - - ML 84 83 3 86 3 1 1 87 162 -6.339 -0.036 -6.339 1.928 -4.156 -3.726 -3.975 D 85 83 3 86 3 0 0 84 159 -11.551 -1.585 -0.585 IL 86 86 3 86 3 1 2 95 171 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 42 - A - - - ML 87 86 3 89 3 1 1 86 161 -6.339 -0.036 -6.339 1.928 -4.156 -3.726 -3.975 D 88 86 3 89 3 0 0 82 157 -11.551 -1.585 -0.585 IL 89 89 3 89 3 1 2 94 170 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 43 - G - - - ML 90 89 3 92 3 1 1 84 159 -6.339 -0.036 -6.339 -2.884 -4.049 1.900 -3.778 D 91 89 3 92 3 0 0 81 155 -11.551 -1.585 -0.585 IL 92 92 3 92 3 1 1 93 168 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 44 - U - - - ML 93 92 3 95 3 1 1 83 157 -6.339 -0.036 -6.339 -3.247 -2.658 -3.450 1.866 D 94 92 3 95 3 0 0 80 154 -11.551 -1.585 -0.585 IL 95 95 3 95 3 1 1 91 167 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 45 - G - - - ML 96 95 3 98 3 1 1 81 156 -6.339 -0.036 -6.339 -2.884 -4.049 1.900 -3.778 D 97 95 3 98 3 0 0 78 152 -11.551 -1.585 -0.585 IL 98 98 3 98 3 1 1 90 165 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 33 ] 46 - g - - - ML 99 98 3 101 3 1 1 80 154 -6.339 -0.036 -6.339 -0.053 -0.104 0.676 -0.977 D 100 98 3 101 3 0 0 77 150 -11.551 -1.585 -0.585 IL 101 101 3 101 3 1 1 89 164 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 47 - g - - - ML 102 101 3 104 3 1 1 79 152 -6.339 -0.036 -6.339 -1.767 0.673 0.825 -1.553 D 103 101 3 104 3 0 0 75 149 -11.551 -1.585 -0.585 IL 104 104 3 104 3 1 1 87 162 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 48 - c - - - ML 105 104 3 107 3 1 1 77 151 -6.339 -0.036 -6.339 0.707 0.808 -1.970 -1.466 D 106 104 3 107 3 0 0 74 147 -11.551 -1.585 -0.585 IL 107 107 3 107 3 1 1 86 160 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 36 ] 49 - a - - - ML 108 107 3 110 3 1 1 76 149 -6.339 -0.036 -6.339 0.785 0.727 -1.954 -1.457 D 109 107 3 110 3 0 0 72 145 -11.551 -1.585 -0.585 IL 110 110 3 110 3 1 1 84 159 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 37 ] 50 - C - - - ML 111 110 3 113 3 1 1 74 147 -6.339 -0.036 -6.339 -3.423 1.874 -3.684 -2.607 D 112 110 3 113 3 0 0 71 143 -11.551 -1.585 -0.585 IL 113 113 3 113 3 1 1 83 157 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 51 - C - - - ML 114 113 3 116 3 1 1 72 145 -6.339 -0.036 -6.339 -2.002 1.253 0.067 -1.647 D 115 113 3 116 3 0 0 69 142 -11.551 -1.585 -0.585 IL 116 116 3 116 3 1 1 82 156 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 52 - G - - - ML 117 116 3 119 3 1 1 71 144 -6.339 -0.036 -6.339 -0.081 -2.682 1.433 -2.336 D 118 116 3 119 3 0 0 67 140 -11.551 -1.585 -0.585 IL 119 119 3 119 3 1 1 80 154 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 53 - A - - - ML 120 119 3 122 3 1 1 69 142 -6.339 -0.036 -6.339 1.240 -2.280 0.228 -1.934 D 121 119 3 122 3 0 0 66 138 -11.551 -1.585 -0.585 IL 122 122 3 122 3 1 1 79 152 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 41 ] 54 - U - - - ML 123 122 3 125 3 1 1 68 140 -6.339 -0.036 -6.339 -3.247 -2.658 -3.450 1.866 D 124 122 3 125 3 0 0 65 136 -11.551 -1.585 -0.585 IL 125 125 3 125 3 1 1 77 150 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 55 - U - - - ML 126 125 3 128 3 1 1 66 138 -6.339 -0.371 -2.221 -2.175 0.174 -2.388 1.298 D 127 125 3 128 3 0 0 64 135 -11.551 -1.585 -0.585 IL 128 128 3 128 3 1 1 76 149 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 56 - C - - - ML 129 128 3 131 3 1 1 64 136 -2.298 -0.356 -6.013 -2.822 1.808 -3.065 -2.071 D 130 128 3 131 3 0 0 63 135 -14.241 -0.157 -3.275 IL 131 131 3 131 3 1 1 64 136 -5.953 -0.024 -13.597 0.000 0.000 0.000 0.000 [ MATL 44 ] 58 - G - - - ML 132 131 3 134 3 1 1 63 135 -6.339 -0.036 -6.339 -2.884 -4.049 1.900 -3.778 D 133 131 3 134 3 0 0 59 131 -11.551 -1.585 -0.585 IL 134 134 3 134 3 1 1 73 146 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 59 - G - - - ML 135 134 3 137 3 1 1 62 133 -6.339 -0.036 -6.339 -2.884 -4.049 1.900 -3.778 D 136 134 3 137 3 0 0 57 128 -11.551 -1.585 -0.585 IL 137 137 3 137 3 1 1 72 144 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 60 - U - - - ML 138 137 3 140 3 1 1 60 131 -6.339 -0.036 -6.339 -3.247 -2.658 -3.450 1.866 D 139 137 3 140 3 0 0 55 126 -11.551 -1.585 -0.585 IL 140 140 3 140 3 1 1 70 142 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 47 ] 61 - G - - - ML 141 140 3 143 3 1 1 58 128 -6.339 -0.036 -6.339 -2.884 -4.049 1.900 -3.778 D 142 140 3 143 3 0 0 53 123 -11.551 -1.585 -0.585 IL 143 143 3 143 3 1 1 69 140 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 62 - C - - - ML 144 143 3 146 3 1 1 56 126 -6.339 -0.036 -6.339 -3.423 1.874 -3.684 -2.607 D 145 143 3 146 3 0 0 50 120 -11.551 -1.585 -0.585 IL 146 146 3 146 3 1 1 67 138 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 63 - U - - - ML 147 146 3 149 3 1 1 53 123 -6.339 -0.036 -6.339 -3.247 -2.658 -3.450 1.866 D 148 146 3 149 3 0 0 47 117 -11.551 -1.585 -0.585 IL 149 149 3 149 3 1 1 65 136 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 50 ] 64 - U - - - ML 150 149 3 152 3 1 1 50 120 -6.339 -0.036 -6.339 -3.247 -2.658 -3.450 1.866 D 151 149 3 152 3 0 0 43 112 -11.551 -1.585 -0.585 IL 152 152 3 152 3 1 1 64 134 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 51 ] 65 - U - - - ML 153 152 3 155 3 1 1 47 116 -6.339 -0.036 -6.339 -3.247 -2.658 -3.450 1.866 D 154 152 3 155 3 0 0 32 101 -11.551 -1.585 -0.585 IL 155 155 3 155 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 52 ] 66 - U - - - ML 156 155 3 158 2 1 1 1 1 * 0.000 -3.247 -2.658 -3.450 1.866 D 157 155 3 158 2 0 0 0 0 * 0.000 IL 158 158 3 158 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 53 ] - - - - - - E 159 158 3 -1 0 0 0 0 0 // HMMER3/f [3.1b3 | July 2016] NAME CLUST_15 LENG 52 MAXL 122 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Wed Feb 7 22:46:36 2018 COM [1] cmbuild --noss -F selected_tracr_clust/CLUST_15.cm selected_tracr_clust/CLUST_15.aln COM [2] cmbuild --noss -F selected_tracr_clust/CLUST_15.cm selected_tracr_clust/CLUST_15.aln NSEQ 9 EFFN 5.893066 STATS LOCAL MSV -6.7801 0.71913 STATS LOCAL VITERBI -8.0976 0.71913 STATS LOCAL FORWARD -3.8112 0.71913 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.38865 1.49349 1.44326 1.23842 1.38629 1.38629 1.38629 1.38629 0.01411 5.57005 4.58488 0.39730 1.11515 0.00000 * 1 0.76295 2.47280 2.54022 0.99286 - a - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 2 0.76295 2.47280 2.54022 0.99286 - a - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 3 1.11379 3.07330 0.56852 2.82921 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 4 1.11379 3.07330 0.56852 2.82921 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 5 2.87720 0.83722 3.02478 0.77170 - u - - : 1.38629 1.38629 1.38629 1.38629 0.35944 4.39359 1.23935 1.46634 0.26236 1.09861 0.40547 6 1.56733 0.79671 2.19522 1.47292 - c - - : 1.38629 1.38629 1.38629 1.38629 0.03479 4.06895 4.06895 1.46634 0.26236 0.08189 2.54299 7 2.86615 0.96515 3.01277 0.66748 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 8 0.47056 2.61259 2.70761 1.44687 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 9 2.05440 3.53861 0.21527 3.31180 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 10 3.63680 3.22845 3.77757 0.09303 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 11 3.75884 0.08750 3.94019 3.19363 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 12 3.75884 0.08750 3.94019 3.19363 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 13 3.38540 4.19270 0.06956 4.00494 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 14 3.63680 3.22845 3.77757 0.09303 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 15 0.56851 2.54228 2.62251 1.26470 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 16 1.14554 1.16563 2.26932 1.32111 - a - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 17 1.14129 1.53647 2.24952 1.02164 - u - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 18 3.75884 0.08750 3.94019 3.19363 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 19 0.05004 4.26712 3.96914 4.14142 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 20 0.30106 3.20342 1.78077 2.97921 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 21 3.75884 0.08750 3.94019 3.19363 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 22 3.63680 3.22845 3.77757 0.09303 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 23 3.63680 3.22845 3.77757 0.09303 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 24 3.38540 4.19270 0.06956 4.00494 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 25 0.30255 2.83355 2.96672 1.89186 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 26 0.05004 4.26712 3.96914 4.14142 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 27 0.05004 4.26712 3.96914 4.14142 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 28 0.05004 4.26712 3.96914 4.14142 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 29 0.05004 4.26712 3.96914 4.14142 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 30 3.38540 4.19270 0.06956 4.00494 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 31 3.63680 3.22845 3.77757 0.09303 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 32 3.38540 4.19270 0.06956 4.00494 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 33 1.42314 1.45846 0.91761 2.06376 - g - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 34 2.61130 0.92011 0.81445 2.46271 - g - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 35 0.89619 0.82651 2.75173 2.40254 - c - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 36 0.84229 0.88254 2.74101 2.39647 - a - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 37 3.75884 0.08750 3.94019 3.19363 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 38 2.77428 0.51760 1.33999 2.52812 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 39 1.44243 3.24534 0.39280 3.00525 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 40 0.52699 2.96688 1.22857 2.72657 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 41 3.63680 3.22845 3.77757 0.09303 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 42 2.89355 1.26594 3.04182 0.48630 - U - - : 1.38629 1.38629 1.38629 1.38629 0.25728 4.39359 1.53948 1.46634 0.26236 1.09861 0.40547 43 3.34221 0.13325 3.51066 2.82146 - C - - : 1.38629 1.38629 1.38629 1.38629 0.24699 1.59276 4.16778 0.01627 4.12645 0.10905 2.27001 44 3.38540 4.19270 0.06956 4.00494 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 45 3.38540 4.19270 0.06956 4.00494 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 46 3.63680 3.22845 3.77757 0.09303 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 47 3.38540 4.19270 0.06956 4.00494 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 48 3.75884 0.08750 3.94019 3.19363 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 49 3.63680 3.22845 3.77757 0.09303 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 50 3.63680 3.22845 3.77757 0.09303 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 51 3.63680 3.22845 3.77757 0.09303 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02502 4.39359 4.39359 1.46634 0.26236 1.09861 0.40547 52 3.63680 3.22845 3.77757 0.09303 - U - - : 1.38629 1.38629 1.38629 1.38629 * 0.00000 * 0.45905 0.99935 0.00000 * // ==> CLUST_16.cm <== INFERNAL1/a [1.1.2 | July 2016] NAME CLUST_16 STATES 151 NODES 51 CLEN 49 W 117 ALPH RNA RF no CONS yes MAP yes DATE Wed Feb 7 22:46:36 2018 COM [1] cmbuild --noss -F selected_tracr_clust/CLUST_16.cm selected_tracr_clust/CLUST_16.aln PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 7 EFFN 6.914551 CKSUM 3482154418 NULL 0.000 0.000 0.000 0.000 EFP7GF -12.7536 0.71921 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 117 195 -8.220 -8.427 -0.022 -6.842 IL 1 1 2 1 4 1 15 119 197 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 14 119 197 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 1 15 117 195 -6.510 -0.032 -6.510 1.945 -4.556 -4.052 -4.383 D 4 2 3 5 3 0 9 114 192 -11.551 -1.585 -0.585 IL 5 5 3 5 3 1 16 125 203 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - A - - - ML 6 5 3 8 3 1 14 116 194 -6.510 -0.032 -6.510 1.945 -4.556 -4.052 -4.383 D 7 5 3 8 3 0 9 113 190 -11.551 -1.585 -0.585 IL 8 8 3 8 3 1 15 123 202 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - G - - - ML 9 8 3 11 3 1 14 115 192 -6.510 -0.032 -6.510 -3.134 -4.356 1.918 -4.084 D 10 8 3 11 3 0 9 112 189 -11.551 -1.585 -0.585 IL 11 11 3 11 3 1 15 122 201 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - G - - - ML 12 11 3 14 3 1 13 113 191 -6.510 -0.032 -6.510 -3.134 -4.356 1.918 -4.084 D 13 11 3 14 3 0 8 110 188 -11.551 -1.585 -0.585 IL 14 14 3 14 3 1 14 121 199 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - C - - - ML 15 14 3 17 3 1 12 112 189 -6.510 -0.032 -6.510 -3.705 1.896 -3.972 -2.871 D 16 14 3 17 3 0 7 109 186 -11.551 -1.585 -0.585 IL 17 17 3 17 3 1 14 120 198 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - U - - - ML 18 17 3 20 3 1 12 111 188 -6.510 -0.032 -6.510 -0.259 -1.943 -2.193 1.425 D 19 17 3 20 3 0 7 108 185 -11.551 -1.585 -0.585 IL 20 20 3 20 3 1 13 118 197 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - U - - - ML 21 20 3 23 3 1 11 109 187 -6.510 -0.032 -6.510 -3.581 -2.950 -3.788 1.893 D 22 20 3 23 3 0 6 106 183 -11.551 -1.585 -0.585 IL 23 23 3 23 3 1 13 117 195 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - C - - - ML 24 23 3 26 3 1 11 108 185 -6.510 -0.032 -6.510 -3.705 1.896 -3.972 -2.871 D 25 23 3 26 3 0 6 105 182 -11.551 -1.585 -0.585 IL 26 26 3 26 3 1 12 116 194 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - A - - - ML 27 26 3 29 3 1 10 107 184 -6.510 -0.032 -6.510 1.407 -2.036 -2.211 -0.172 D 28 26 3 29 3 0 5 104 181 -11.551 -1.585 -0.585 IL 29 29 3 29 3 1 11 115 193 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - U - - - ML 30 29 3 32 3 1 10 106 182 -6.510 -0.032 -6.510 -3.581 -2.950 -3.788 1.893 D 31 29 3 32 3 0 5 103 179 -11.551 -1.585 -0.585 IL 32 32 3 32 3 1 11 113 191 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - G - - - ML 33 32 3 35 3 1 9 104 181 -6.510 -0.032 -6.510 -3.134 -4.356 1.918 -4.084 D 34 32 3 35 3 0 4 101 178 -11.551 -1.585 -0.585 IL 35 35 3 35 3 1 10 112 190 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - C - - - ML 36 35 3 38 3 1 9 103 180 -6.510 -0.032 -6.510 -3.705 1.896 -3.972 -2.871 D 37 35 3 38 3 0 4 100 176 -11.551 -1.585 -0.585 IL 38 38 3 38 3 1 10 111 188 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - C - - - ML 39 38 3 41 3 1 8 102 178 -6.510 -0.032 -6.510 -3.705 1.896 -3.972 -2.871 D 40 38 3 41 3 0 3 99 175 -11.551 -1.585 -0.585 IL 41 41 3 41 3 1 9 110 187 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - G - - - ML 42 41 3 44 3 1 8 100 177 -6.510 -0.032 -6.510 -3.134 -4.356 1.918 -4.084 D 43 41 3 44 3 0 3 97 173 -11.551 -1.585 -0.585 IL 44 44 3 44 3 1 9 108 186 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - A - - - ML 45 44 3 47 3 1 7 99 175 -6.510 -0.032 -6.510 1.945 -4.556 -4.052 -4.383 D 46 44 3 47 3 0 2 96 172 -11.551 -1.585 -0.585 IL 47 47 3 47 3 1 8 107 184 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - A - - - ML 48 47 3 50 3 1 7 98 174 -6.510 -0.032 -6.510 1.945 -4.556 -4.052 -4.383 D 49 47 3 50 3 0 2 95 170 -11.551 -1.585 -0.585 IL 50 50 3 50 3 1 8 106 183 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - a - - - ML 51 50 3 53 3 1 6 96 172 -6.510 -0.032 -6.510 0.830 -1.755 -1.873 0.725 D 52 50 3 53 3 0 1 93 169 -11.551 -1.585 -0.585 IL 53 53 3 53 3 1 7 105 181 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - U - - - ML 54 53 3 56 3 1 6 95 171 -6.510 -0.032 -6.510 -3.581 -2.950 -3.788 1.893 D 55 53 3 56 3 0 1 92 167 -11.551 -1.585 -0.585 IL 56 56 3 56 3 1 7 103 180 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - C - - - ML 57 56 3 59 3 1 5 94 169 -6.510 -0.032 -6.510 -2.853 1.516 -3.115 -0.173 D 58 56 3 59 3 0 1 91 166 -11.551 -1.585 -0.585 IL 59 59 3 59 3 1 6 102 178 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 20 - A - - - ML 60 59 3 62 3 1 5 92 168 -6.510 -0.032 -6.510 1.945 -4.556 -4.052 -4.383 D 61 59 3 62 3 0 0 89 165 -11.551 -1.585 -0.585 IL 62 62 3 62 3 1 6 101 177 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 21 - A - - - ML 63 62 3 65 3 1 4 91 166 -2.089 -0.407 -6.510 1.427 -0.230 -2.407 -1.887 D 64 62 3 65 3 0 0 88 163 -11.551 -1.585 -0.585 IL 65 65 3 65 3 1 5 91 166 -6.693 -0.014 -14.336 0.000 0.000 0.000 0.000 [ MATL 22 ] 23 - C - - - ML 66 65 3 68 3 1 4 90 165 -6.510 -0.032 -6.510 -3.705 1.896 -3.972 -2.871 D 67 65 3 68 3 0 0 87 162 -11.551 -1.585 -0.585 IL 68 68 3 68 3 1 5 98 174 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 24 - A - - - ML 69 68 3 71 3 1 4 89 164 -6.510 -0.032 -6.510 1.486 -2.769 -0.204 -2.437 D 70 68 3 71 3 0 0 85 160 -11.551 -1.585 -0.585 IL 71 71 3 71 3 1 4 97 173 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 25 - C - - - ML 72 71 3 74 3 1 3 87 162 -6.510 -0.032 -6.510 -3.705 1.896 -3.972 -2.871 D 73 71 3 74 3 0 0 84 159 -11.551 -1.585 -0.585 IL 74 74 3 74 3 1 4 96 171 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 26 - C - - - ML 75 74 3 77 3 1 3 86 160 -6.510 -0.032 -6.510 -3.705 1.896 -3.972 -2.871 D 76 74 3 77 3 0 0 83 157 -11.551 -1.585 -0.585 IL 77 77 3 77 3 1 3 94 170 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 27 - C - - - ML 78 77 3 80 3 1 2 84 159 -6.510 -0.032 -6.510 -3.705 1.896 -3.972 -2.871 D 79 77 3 80 3 0 0 82 156 -11.551 -1.585 -0.585 IL 80 80 3 80 3 1 2 93 168 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 28 - U - - - ML 81 80 3 83 3 1 1 83 157 -6.510 -0.194 -3.122 -2.457 0.248 -2.680 1.307 D 82 80 3 83 3 0 0 81 155 -11.551 -1.585 -0.585 IL 83 83 3 83 3 1 3 92 167 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 29 - g - - - ML 84 83 3 86 3 1 1 82 156 -6.352 -0.036 -6.352 0.343 -0.431 0.566 -0.973 D 85 83 3 86 3 0 0 80 154 -13.606 -0.252 -2.641 IL 86 86 3 86 3 1 2 90 165 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 30 - u - - - ML 87 86 3 89 3 1 1 80 154 -6.510 -0.032 -6.510 -1.217 -0.239 0.075 0.739 D 88 86 3 89 3 0 0 77 151 -11.551 -1.585 -0.585 IL 89 89 3 89 3 1 1 89 164 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 31 - c - - - ML 90 89 3 92 3 1 1 79 153 -6.510 -0.032 -6.510 -0.143 0.255 -0.421 0.207 D 91 89 3 92 3 0 0 76 149 -11.551 -1.585 -0.585 IL 92 92 3 92 3 1 1 88 162 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 32 - u - - - ML 93 92 3 95 3 1 1 77 151 -6.510 -0.032 -6.510 0.352 -0.498 -1.402 0.711 D 94 92 3 95 3 0 0 74 148 -11.551 -1.585 -0.585 IL 95 95 3 95 3 1 1 86 161 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 33 - U - - - ML 96 95 3 98 3 1 1 76 149 -6.510 -0.032 -6.510 -0.259 -1.943 -2.193 1.425 D 97 95 3 98 3 0 0 73 146 -11.551 -1.585 -0.585 IL 98 98 3 98 3 1 1 85 159 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 33 ] 34 - U - - - ML 99 98 3 101 3 1 1 75 148 -6.510 -0.032 -6.510 -0.656 -2.078 -2.420 1.557 D 100 98 3 101 3 0 0 72 144 -11.551 -1.585 -0.585 IL 101 101 3 101 3 1 1 84 158 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 35 - u - - - ML 102 101 3 104 3 1 1 73 146 -6.510 -0.178 -3.250 -0.372 -1.330 -0.213 0.976 D 103 101 3 104 3 0 0 70 143 -11.551 -1.585 -0.585 IL 104 104 3 104 3 1 1 82 156 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 36 - u - - - ML 105 104 3 107 3 1 1 72 145 -6.367 -0.035 -6.367 -0.216 -0.365 -0.354 0.660 D 106 104 3 107 3 0 0 70 142 -13.500 -0.274 -2.534 IL 107 107 3 107 3 1 1 81 155 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 36 ] 37 - A - - - ML 108 107 3 110 3 1 1 70 143 -6.510 -0.274 -2.628 1.945 -4.556 -4.052 -4.383 D 109 107 3 110 3 0 0 66 138 -11.551 -1.585 -0.585 IL 110 110 3 110 3 1 1 80 154 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 37 ] 38 - U - - - ML 111 110 3 113 3 1 1 69 141 -6.274 -0.038 -6.274 -2.034 0.442 -2.242 1.128 D 112 110 3 113 3 0 0 63 135 -14.031 -4.066 -0.089 IL 113 113 3 113 3 1 1 79 152 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 39 - G - - - ML 114 113 3 116 3 1 1 67 139 -6.274 -0.468 -1.921 -2.790 -3.930 1.892 -3.659 D 115 113 3 116 3 0 0 63 134 -14.031 -4.066 -0.089 IL 116 116 3 116 3 1 1 78 151 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 40 - G - - - ML 117 116 3 119 3 1 1 66 138 -1.129 -0.928 -5.857 -0.050 -1.926 1.284 -1.574 D 118 116 3 119 3 0 0 63 134 -15.143 -5.177 -0.040 IL 119 119 3 119 3 1 2 66 137 -7.009 -0.011 -14.653 0.000 0.000 0.000 0.000 [ MATL 40 ] 42 - g - - - ML 120 119 3 122 3 1 1 65 136 -5.857 -0.051 -5.857 0.448 -1.662 0.937 -1.304 D 121 119 3 122 3 0 0 62 134 -15.143 -0.082 -4.177 IL 122 122 3 122 3 1 1 74 147 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 41 ] 43 - G - - - ML 123 122 3 125 3 1 1 63 134 -6.510 -0.032 -6.510 -3.134 -4.356 1.918 -4.084 D 124 122 3 125 3 0 0 59 130 -11.551 -1.585 -0.585 IL 125 125 3 125 3 1 1 73 145 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 44 - G - - - ML 126 125 3 128 3 1 1 61 132 -6.510 -0.032 -6.510 -3.134 -4.356 1.918 -4.084 D 127 125 3 128 3 0 0 57 128 -11.551 -1.585 -0.585 IL 128 128 3 128 3 1 1 71 143 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 45 - G - - - ML 129 128 3 131 3 1 1 59 130 -6.510 -0.032 -6.510 -3.134 -4.356 1.918 -4.084 D 130 128 3 131 3 0 0 55 125 -11.551 -1.585 -0.585 IL 131 131 3 131 3 1 1 70 142 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 46 - U - - - ML 132 131 3 134 3 1 1 57 128 -6.510 -0.032 -6.510 -2.553 -0.173 -2.784 1.484 D 133 131 3 134 3 0 0 53 123 -11.551 -1.585 -0.585 IL 134 134 3 134 3 1 1 68 140 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 47 - G - - - ML 135 134 3 137 3 1 1 55 125 -6.510 -0.032 -6.510 -3.134 -4.356 1.918 -4.084 D 136 134 3 137 3 0 0 50 120 -11.551 -1.585 -0.585 IL 137 137 3 137 3 1 1 67 138 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 48 - u - - - ML 138 137 3 140 3 1 1 53 123 -6.510 -0.032 -6.510 -1.248 0.103 -0.249 0.734 D 139 137 3 140 3 0 0 47 116 -11.551 -1.585 -0.585 IL 140 140 3 140 3 1 1 65 136 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 47 ] 49 - U - - - ML 141 140 3 143 3 1 1 50 119 -6.510 -0.032 -6.510 -3.581 -2.950 -3.788 1.893 D 142 140 3 143 3 0 0 42 112 -11.551 -1.585 -0.585 IL 143 143 3 143 3 1 1 64 134 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 50 - U - - - ML 144 143 3 146 3 1 1 46 115 -6.510 -0.032 -6.510 -3.581 -2.950 -3.788 1.893 D 145 143 3 146 3 0 0 32 101 -11.551 -1.585 -0.585 IL 146 146 3 146 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 51 - U - - - ML 147 146 3 149 2 1 1 1 1 * 0.000 -3.581 -2.950 -3.788 1.893 D 148 146 3 149 2 0 0 0 0 * 0.000 IL 149 149 3 149 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 50 ] - - - - - - E 150 149 3 -1 0 0 0 0 0 // HMMER3/f [3.1b3 | July 2016] NAME CLUST_16 LENG 49 MAXL 117 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Wed Feb 7 22:46:36 2018 COM [1] cmbuild --noss -F selected_tracr_clust/CLUST_16.cm selected_tracr_clust/CLUST_16.aln COM [2] cmbuild --noss -F selected_tracr_clust/CLUST_16.cm selected_tracr_clust/CLUST_16.aln NSEQ 7 EFFN 6.914551 STATS LOCAL MSV -7.1542 0.71921 STATS LOCAL VITERBI -7.9598 0.71921 STATS LOCAL FORWARD -3.8243 0.71921 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.43163 1.42965 1.41818 1.27464 1.38629 1.38629 1.38629 1.38629 0.01241 5.69799 4.71281 0.39730 1.11515 0.00000 * 1 0.03842 4.54410 4.19463 4.42421 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02219 4.51246 4.51246 1.46634 0.26236 1.09861 0.40547 2 0.03842 4.54410 4.19463 4.42421 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02219 4.51246 4.51246 1.46634 0.26236 1.09861 0.40547 3 3.55895 4.40571 0.05701 4.21734 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02219 4.51246 4.51246 1.46634 0.26236 1.09861 0.40547 4 3.55895 4.40571 0.05701 4.21734 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02219 4.51246 4.51246 1.46634 0.26236 1.09861 0.40547 5 3.95468 0.07178 4.13950 3.37653 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02219 4.51246 4.51246 1.46634 0.26236 1.09861 0.40547 6 1.56572 2.73280 2.90609 0.39849 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02219 4.51246 4.51246 1.46634 0.26236 1.09861 0.40547 7 3.86845 3.43129 4.01159 0.07401 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02219 4.51246 4.51246 1.46634 0.26236 1.09861 0.40547 8 3.95468 0.07178 4.13950 3.37653 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02219 4.51246 4.51246 1.46634 0.26236 1.09861 0.40547 9 0.41086 2.79726 2.91904 1.50526 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02219 4.51246 4.51246 1.46634 0.26236 1.09861 0.40547 10 3.86845 3.43129 4.01159 0.07401 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02219 4.51246 4.51246 1.46634 0.26236 1.09861 0.40547 11 3.55895 4.40571 0.05701 4.21734 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02219 4.51246 4.51246 1.46634 0.26236 1.09861 0.40547 12 3.95468 0.07178 4.13950 3.37653 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02219 4.51246 4.51246 1.46634 0.26236 1.09861 0.40547 13 3.95468 0.07178 4.13950 3.37653 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02219 4.51246 4.51246 1.46634 0.26236 1.09861 0.40547 14 3.55895 4.40571 0.05701 4.21734 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02219 4.51246 4.51246 1.46634 0.26236 1.09861 0.40547 15 0.03842 4.54410 4.19463 4.42421 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02219 4.51246 4.51246 1.46634 0.26236 1.09861 0.40547 16 0.03842 4.54410 4.19463 4.42421 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02219 4.51246 4.51246 1.46634 0.26236 1.09861 0.40547 17 0.81107 2.60247 2.68446 0.88366 - a - - : 1.38629 1.38629 1.38629 1.38629 0.02219 4.51246 4.51246 1.46634 0.26236 1.09861 0.40547 18 3.86845 3.43129 4.01159 0.07401 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02219 4.51246 4.51246 1.46634 0.26236 1.09861 0.40547 19 3.36388 0.33582 3.54566 1.50597 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02219 4.51246 4.51246 1.46634 0.26236 1.09861 0.40547 20 0.03842 4.54410 4.19463 4.42421 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02219 4.51246 4.51246 1.46634 0.26236 1.09861 0.40547 21 0.39730 1.54590 3.05476 2.69392 - A - - : 1.38629 1.38629 1.38629 1.38629 0.28242 1.44786 4.51246 0.00972 4.63889 1.09861 0.40547 22 3.95468 0.07178 4.13950 3.37653 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02219 4.51246 4.51246 1.46634 0.26236 1.09861 0.40547 23 0.35648 3.30578 1.52772 3.07563 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02219 4.51246 4.51246 1.46634 0.26236 1.09861 0.40547 24 3.95468 0.07178 4.13950 3.37652 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02219 4.51246 4.51246 1.46634 0.26236 1.09861 0.40547 25 3.95468 0.07178 4.13950 3.37653 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02219 4.51246 4.51246 1.46634 0.26236 1.09861 0.40547 26 3.95468 0.07178 4.13950 3.37653 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02219 4.51246 4.51246 1.46634 0.26236 1.09861 0.40547 27 3.08902 1.21451 3.24410 0.48031 - U - - : 1.38629 1.38629 1.38629 1.38629 0.13451 4.51246 2.16383 1.46634 0.26236 1.09861 0.40547 28 1.14873 1.68491 0.99390 2.06065 - g - - : 1.38629 1.38629 1.38629 1.38629 0.02479 4.40274 4.40274 1.46634 0.26236 0.17479 1.83028 29 2.23001 1.55223 1.33400 0.87400 - u - - : 1.38629 1.38629 1.38629 1.38629 0.02219 4.51246 4.51246 1.46634 0.26236 1.09861 0.40547 30 1.48532 1.20957 1.67818 1.24295 - c - - : 1.38629 1.38629 1.38629 1.38629 0.02219 4.51246 4.51246 1.46634 0.26236 1.09861 0.40547 31 1.14245 1.73143 2.35802 0.89324 - u - - : 1.38629 1.38629 1.38629 1.38629 0.02219 4.51246 4.51246 1.46634 0.26236 1.09861 0.40547 32 1.56572 2.73280 2.90609 0.39849 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02219 4.51246 4.51246 1.46634 0.26236 1.09861 0.40547 33 1.84108 2.82686 3.06376 0.30728 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02219 4.51246 4.51246 1.46634 0.26236 1.09861 0.40547 34 1.64420 2.30802 1.53387 0.70994 - u - - : 1.38629 1.38629 1.38629 1.38629 0.12339 4.51246 2.25274 1.46634 0.26236 1.09861 0.40547 35 1.53580 1.63932 1.63136 0.92902 - u - - : 1.38629 1.38629 1.38629 1.38629 0.02452 4.41359 4.41359 1.46634 0.26236 0.18960 1.75616 36 0.03842 4.54410 4.19463 4.42421 - A - - : 1.38629 1.38629 1.38629 1.38629 0.18962 4.51246 1.82169 1.46634 0.26236 1.09861 0.40547 37 2.79612 1.07994 2.94035 0.60424 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02618 4.34902 4.34902 1.46634 0.26236 2.81798 0.06158 38 3.32033 4.11029 0.07508 3.92252 - G - - : 1.38629 1.38629 1.38629 1.38629 0.32437 4.34902 1.33143 1.46634 0.26236 2.81798 0.06158 39 1.42092 2.72125 0.49631 2.47760 - G - - : 1.38629 1.38629 1.38629 1.38629 0.64351 0.78241 4.05976 0.00779 4.85847 3.58864 0.02802 40 1.07581 2.53824 0.73657 2.29049 - g - - : 1.38629 1.38629 1.38629 1.38629 0.03512 4.05976 4.05976 1.46634 0.26236 0.05686 2.89550 41 3.55895 4.40571 0.05701 4.21734 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02219 4.51246 4.51246 1.46634 0.26236 1.09861 0.40547 42 3.55895 4.40571 0.05701 4.21734 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02219 4.51246 4.51246 1.46634 0.26236 1.09861 0.40547 43 3.55895 4.40571 0.05701 4.21734 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02219 4.51246 4.51246 1.46634 0.26236 1.09861 0.40547 44 3.15563 1.50617 3.31569 0.35764 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02219 4.51246 4.51246 1.46634 0.26236 1.09861 0.40547 45 3.55895 4.40571 0.05701 4.21734 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02219 4.51246 4.51246 1.46634 0.26236 1.09861 0.40547 46 2.25145 1.31456 1.55873 0.87765 - u - - : 1.38629 1.38629 1.38629 1.38629 0.02219 4.51246 4.51246 1.46634 0.26236 1.09861 0.40547 47 3.86845 3.43129 4.01159 0.07401 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02219 4.51246 4.51246 1.46634 0.26236 1.09861 0.40547 48 3.86845 3.43129 4.01159 0.07401 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02219 4.51246 4.51246 1.46634 0.26236 1.09861 0.40547 49 3.86845 3.43129 4.01159 0.07401 - U - - : 1.38629 1.38629 1.38629 1.38629 * 0.00000 * 0.45905 0.99935 0.00000 * // ==> CLUST_17.cm <== INFERNAL1/a [1.1.2 | July 2016] NAME CLUST_17 STATES 187 NODES 63 CLEN 61 W 130 ALPH RNA RF no CONS yes MAP yes DATE Wed Feb 7 22:46:36 2018 COM [1] cmbuild --noss -F selected_tracr_clust/CLUST_17.cm selected_tracr_clust/CLUST_17.aln PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 19 EFFN 8.382080 CKSUM 1397969595 NULL 0.000 0.000 0.000 0.000 EFP7GF -11.9773 0.71892 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 130 209 -8.450 -8.657 -0.019 -7.071 IL 1 1 2 1 4 1 16 132 211 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 15 132 211 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 1 16 130 209 -6.725 -0.028 -6.725 1.959 -5.017 -4.415 -4.848 D 4 2 3 5 3 0 10 127 206 -11.551 -1.585 -0.585 IL 5 5 3 5 3 1 17 137 217 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - A - - - ML 6 5 3 8 3 1 15 129 208 -6.725 -0.028 -6.725 1.959 -5.017 -4.415 -4.848 D 7 5 3 8 3 0 9 126 205 -11.551 -1.585 -0.585 IL 8 8 3 8 3 1 16 136 216 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - G - - - ML 9 8 3 11 3 1 14 128 207 -6.725 -0.028 -6.725 -3.451 -4.727 1.936 -4.452 D 10 8 3 11 3 0 9 125 203 -11.551 -1.585 -0.585 IL 11 11 3 11 3 1 16 135 215 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - G - - - ML 12 11 3 14 3 1 14 127 205 -6.725 -0.028 -6.725 -3.451 -4.727 1.936 -4.452 D 13 11 3 14 3 0 8 124 202 -11.551 -1.585 -0.585 IL 14 14 3 14 3 1 15 134 214 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - A - - - ML 15 14 3 17 3 1 13 125 204 -6.725 -0.028 -6.725 1.840 -4.109 -1.769 -3.856 D 16 14 3 17 3 0 7 122 201 -11.551 -1.585 -0.585 IL 17 17 3 17 3 1 14 133 212 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - U - - - ML 18 17 3 20 3 1 12 124 203 -6.725 -0.028 -6.725 -3.970 -3.305 -4.177 1.918 D 19 17 3 20 3 0 7 121 200 -11.551 -1.585 -0.585 IL 20 20 3 20 3 1 14 132 211 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - U - - - ML 21 20 3 23 3 1 12 123 201 -6.725 -0.028 -6.725 -3.369 -1.540 -3.652 1.799 D 22 20 3 23 3 0 6 120 198 -11.551 -1.585 -0.585 IL 23 23 3 23 3 1 13 130 210 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - A - - - ML 24 23 3 26 3 1 11 122 200 -6.725 -0.028 -6.725 1.791 -3.121 -3.447 -1.584 D 25 23 3 26 3 0 6 119 197 -11.551 -1.585 -0.585 IL 26 26 3 26 3 1 12 129 208 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - U - - - ML 27 26 3 29 3 1 11 120 199 -6.725 -0.028 -6.725 -3.970 -3.305 -4.177 1.918 D 28 26 3 29 3 0 5 118 196 -11.551 -1.585 -0.585 IL 29 29 3 29 3 1 12 128 207 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - U - - - ML 30 29 3 32 3 1 10 119 197 -6.725 -0.028 -6.725 -3.307 -1.346 -3.585 1.775 D 31 29 3 32 3 0 4 116 194 -11.551 -1.585 -0.585 IL 32 32 3 32 3 1 11 127 206 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - C - - - ML 33 32 3 35 3 1 9 118 196 -6.725 -0.028 -6.725 -4.030 1.918 -4.299 -3.186 D 34 32 3 35 3 0 4 115 193 -11.551 -1.585 -0.585 IL 35 35 3 35 3 1 11 126 204 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - C - - - ML 36 35 3 38 3 1 9 117 195 -6.725 -0.028 -6.725 -4.030 1.918 -4.299 -3.186 D 37 35 3 38 3 0 4 114 192 -11.551 -1.585 -0.585 IL 38 38 3 38 3 1 10 124 203 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - G - - - ML 39 38 3 41 3 1 8 116 193 -6.725 -0.028 -6.725 -3.451 -4.727 1.936 -4.452 D 40 38 3 41 3 0 3 113 190 -11.551 -1.585 -0.585 IL 41 41 3 41 3 1 9 123 202 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - U - - - ML 42 41 3 44 3 1 8 114 192 -6.725 -0.028 -6.725 -3.970 -3.305 -4.177 1.918 D 43 41 3 44 3 0 3 111 189 -11.551 -1.585 -0.585 IL 44 44 3 44 3 1 9 122 201 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - U - - - ML 45 44 3 47 3 1 7 113 191 -6.725 -0.028 -6.725 -3.970 -3.305 -4.177 1.918 D 46 44 3 47 3 0 2 110 188 -11.551 -1.585 -0.585 IL 47 47 3 47 3 1 8 121 199 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - G - - - ML 48 47 3 50 3 1 7 112 189 -6.725 -0.028 -6.725 -3.451 -4.727 1.936 -4.452 D 49 47 3 50 3 0 2 109 186 -11.551 -1.585 -0.585 IL 50 50 3 50 3 1 8 120 198 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - U - - - ML 51 50 3 53 3 1 6 111 188 -6.725 -0.028 -6.725 -3.970 -3.305 -4.177 1.918 D 52 50 3 53 3 0 1 108 185 -11.551 -1.585 -0.585 IL 53 53 3 53 3 1 7 118 197 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - G - - - ML 54 53 3 56 3 1 6 109 187 -6.725 -0.028 -6.725 -3.451 -4.727 1.936 -4.452 D 55 53 3 56 3 0 1 106 183 -11.551 -1.585 -0.585 IL 56 56 3 56 3 1 7 117 195 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - A - - - ML 57 56 3 59 3 1 5 108 185 -6.725 -0.028 -6.725 1.790 -3.118 -3.444 -1.579 D 58 56 3 59 3 0 1 105 182 -11.551 -1.585 -0.585 IL 59 59 3 59 3 1 6 116 194 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 20 - A - - - ML 60 59 3 62 3 1 5 107 184 -6.725 -0.028 -6.725 1.959 -5.017 -4.415 -4.848 D 61 59 3 62 3 0 0 104 181 -11.551 -1.585 -0.585 IL 62 62 3 62 3 1 6 115 193 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 21 - A - - - ML 63 62 3 65 3 1 4 106 183 -6.725 -0.028 -6.725 1.959 -5.017 -4.415 -4.848 D 64 62 3 65 3 0 0 103 179 -11.551 -1.585 -0.585 IL 65 65 3 65 3 1 5 113 191 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 22 ] 22 - A - - - ML 66 65 3 68 3 1 4 104 181 -6.725 -0.028 -6.725 1.959 -5.017 -4.415 -4.848 D 67 65 3 68 3 0 0 101 178 -11.551 -1.585 -0.585 IL 68 68 3 68 3 1 5 112 190 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 23 - C - - - ML 69 68 3 71 3 1 4 103 180 -6.725 -0.028 -6.725 -4.030 1.918 -4.299 -3.186 D 70 68 3 71 3 0 0 100 177 -11.551 -1.585 -0.585 IL 71 71 3 71 3 1 4 111 189 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 24 - A - - - ML 72 71 3 74 3 1 3 102 178 -6.725 -0.028 -6.725 1.959 -5.017 -4.415 -4.848 D 73 71 3 74 3 0 0 99 175 -11.551 -1.585 -0.585 IL 74 74 3 74 3 1 4 110 187 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 25 - U - - - ML 75 74 3 77 3 1 3 101 177 -6.725 -0.028 -6.725 -0.382 -2.287 -2.607 1.518 D 76 74 3 77 3 0 0 98 174 -11.551 -1.585 -0.585 IL 77 77 3 77 3 1 4 109 186 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 26 - U - - - ML 78 77 3 80 3 1 2 99 176 -6.725 -0.028 -6.725 -0.404 -0.454 -1.765 1.151 D 79 77 3 80 3 0 0 96 172 -11.551 -1.585 -0.585 IL 80 80 3 80 3 1 3 107 185 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 27 - u - - - ML 81 80 3 83 3 1 2 98 174 -6.725 -0.028 -6.725 0.013 -0.122 -1.589 0.799 D 82 80 3 83 3 0 0 95 171 -11.551 -1.585 -0.585 IL 83 83 3 83 3 1 3 106 183 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 28 - A - - - ML 84 83 3 86 3 1 2 97 173 -6.725 -0.028 -6.725 1.652 -3.455 -0.613 -3.145 D 85 83 3 86 3 0 0 94 170 -11.551 -1.585 -0.585 IL 86 86 3 86 3 1 3 105 182 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 29 - G - - - ML 87 86 3 89 3 1 2 96 172 -6.725 -0.028 -6.725 0.490 -3.070 1.217 -2.724 D 88 86 3 89 3 0 0 93 168 -11.551 -1.585 -0.585 IL 89 89 3 89 3 1 2 104 181 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 30 - u - - - ML 90 89 3 92 3 1 1 94 170 -6.725 -0.028 -6.725 0.181 -0.668 0.081 0.238 D 91 89 3 92 3 0 0 91 167 -11.551 -1.585 -0.585 IL 92 92 3 92 3 1 2 102 179 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 31 - G - - - ML 93 92 3 95 3 1 1 93 169 -6.725 -0.545 -1.713 -0.797 -1.965 1.188 -0.169 D 94 92 3 95 3 0 0 90 166 -11.551 -1.585 -0.585 IL 95 95 3 95 3 1 2 102 179 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 32 - c - - - ML 96 95 3 98 3 1 1 93 168 -6.220 -0.039 -6.220 -1.007 0.275 0.240 0.152 D 97 95 3 98 3 0 0 89 164 -15.065 -5.099 -0.043 IL 98 98 3 98 3 1 2 101 177 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 33 ] 33 - G - - - ML 99 98 3 101 3 1 1 91 166 -6.220 -0.103 -4.176 -0.392 -2.662 1.526 -2.320 D 100 98 3 101 3 0 0 89 164 -15.065 -2.532 -0.274 IL 101 101 3 101 3 1 2 99 176 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 34 - G - - - ML 102 101 3 104 3 1 1 90 165 -6.254 -0.220 -2.961 -1.809 -1.272 1.626 -2.222 D 103 101 3 104 3 0 0 88 163 -14.987 -0.248 -2.664 IL 104 104 3 104 3 1 1 98 174 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 35 - C - - - ML 105 104 3 107 3 1 1 89 164 -6.553 -0.031 -6.553 -3.045 1.608 -3.324 -0.453 D 106 104 3 107 3 0 0 85 160 -13.866 -1.856 -0.467 IL 107 107 3 107 3 1 1 97 173 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 36 ] 36 - C - - - ML 108 107 3 110 3 1 1 87 162 -6.600 -0.285 -2.565 -1.165 1.410 -2.385 -0.504 D 109 107 3 110 3 0 0 85 159 -13.527 -3.562 -0.128 IL 110 110 3 110 3 1 1 96 172 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 37 ] 37 - C - - - ML 111 110 3 113 3 1 1 86 161 -6.351 -0.036 -6.351 -1.560 1.167 -0.876 -0.201 D 112 110 3 113 3 0 0 84 159 -14.731 -0.110 -3.766 IL 113 113 3 113 3 1 1 94 170 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 38 - u - - - ML 114 113 3 116 3 1 1 85 159 -1.398 -0.825 -4.158 -0.785 -0.251 -0.673 0.965 D 115 113 3 116 3 0 0 80 155 -11.551 -1.585 -0.585 IL 116 116 3 116 3 1 2 86 160 -0.662 -1.442 -16.701 0.000 0.000 0.000 0.000 [ MATL 39 ] 43 - c - - - ML 117 116 3 119 3 1 1 82 156 -6.657 -0.029 -6.657 -0.071 0.724 -0.431 -0.611 D 118 116 3 119 3 0 0 79 153 -12.953 -2.987 -0.195 IL 119 119 3 119 3 1 1 90 166 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 44 - G - - - ML 120 119 3 122 3 1 1 81 155 -6.657 -0.029 -6.657 -0.410 -2.055 1.254 -0.686 D 121 119 3 122 3 0 0 79 153 -12.953 -0.420 -1.987 IL 122 122 3 122 3 1 1 89 164 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 41 ] 45 - u - - - ML 123 122 3 125 3 1 1 79 153 -6.725 -0.028 -6.725 0.312 -0.122 -0.798 0.339 D 124 122 3 125 3 0 0 76 150 -11.551 -1.585 -0.585 IL 125 125 3 125 3 1 1 88 163 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 46 - c - - - ML 126 125 3 128 3 1 1 78 152 -6.725 -0.028 -6.725 -0.231 0.690 -0.824 -0.044 D 127 125 3 128 3 0 0 74 148 -11.551 -1.585 -0.585 IL 128 128 3 128 3 1 1 87 162 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 47 - U - - - ML 129 128 3 131 3 1 1 77 150 -6.725 -0.108 -3.993 -1.477 -0.486 -2.364 1.450 D 130 128 3 131 3 0 0 73 146 -11.551 -1.585 -0.585 IL 131 131 3 131 3 1 1 85 160 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 48 - u - - - ML 132 131 3 134 3 1 1 75 149 -6.646 -0.029 -6.646 0.237 -0.029 -1.486 0.570 D 133 131 3 134 3 0 0 70 143 -13.078 -3.112 -0.177 IL 134 134 3 134 3 1 1 84 159 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 49 - g - - - ML 135 134 3 137 3 1 1 74 147 -6.646 -0.029 -6.646 -0.936 -1.123 0.656 0.528 D 136 134 3 137 3 0 0 69 142 -13.078 -3.112 -0.177 IL 137 137 3 137 3 1 1 83 157 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 50 - c - - - ML 138 137 3 140 3 1 1 72 146 -6.646 -0.446 -1.966 0.215 0.651 -1.591 -0.094 D 139 137 3 140 3 0 0 68 141 -13.078 -3.112 -0.177 IL 140 140 3 140 3 1 1 82 156 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 47 ] 51 - a - - - ML 141 140 3 143 3 1 1 72 145 -6.239 -0.039 -6.239 0.565 -0.651 -1.211 0.538 D 142 140 3 143 3 0 0 68 140 -15.023 -5.057 -0.044 IL 143 143 3 143 3 1 1 81 155 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 52 - c - - - ML 144 143 3 146 3 1 1 70 143 -6.239 -0.171 -3.342 -0.266 0.364 -0.529 0.249 D 145 143 3 146 3 0 0 67 140 -15.023 -0.684 -1.405 IL 146 146 3 146 3 1 1 79 153 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 53 - U - - - ML 147 146 3 149 3 1 1 69 141 -6.473 -0.033 -6.473 -2.760 -0.986 -3.009 1.689 D 148 146 3 149 3 0 0 63 135 -14.289 -4.323 -0.074 IL 149 149 3 149 3 1 1 78 152 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 50 ] 54 - u - - - ML 150 149 3 152 3 1 1 67 140 -6.473 -0.112 -3.976 -0.130 -0.677 0.181 0.408 D 151 149 3 152 3 0 0 63 135 -14.289 -1.757 -0.506 IL 152 152 3 152 3 1 1 77 150 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 51 ] 55 - u - - - ML 153 152 3 155 3 1 1 66 138 -6.477 -0.033 -6.477 -0.606 0.272 -0.741 0.620 D 154 152 3 155 3 0 0 61 133 -14.269 -1.406 -0.684 IL 155 155 3 155 3 1 1 75 148 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 52 ] 56 - g - - - ML 156 155 3 158 3 1 1 64 136 -6.578 -0.173 -3.284 -0.738 -0.700 0.747 0.146 D 157 155 3 158 3 0 0 55 127 -13.698 -3.732 -0.113 IL 158 158 3 158 3 1 1 74 147 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 53 ] 57 - G - - - ML 159 158 3 161 3 1 1 63 134 -6.438 -0.034 -6.438 -0.472 -2.076 1.346 -1.002 D 160 158 3 161 3 0 0 52 123 -14.431 -4.466 -0.067 IL 161 161 3 161 3 1 1 73 145 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 54 ] 58 - G - - - ML 162 161 3 164 3 1 1 61 132 -6.438 -0.147 -3.550 -1.989 -2.793 1.669 -1.239 D 163 161 3 164 3 0 0 50 121 -14.431 -4.466 -0.067 IL 164 164 3 164 3 1 1 72 144 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 55 ] 59 - G - - - ML 165 164 3 167 3 1 1 60 131 -6.328 -0.036 -6.328 -2.868 -4.029 1.898 -3.758 D 166 164 3 167 3 0 0 48 118 -14.799 -4.833 -0.052 IL 167 167 3 167 3 1 1 70 142 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 56 ] 60 - g - - - ML 168 167 3 170 3 1 1 58 128 -6.328 -0.036 -6.328 -1.748 0.643 0.845 -1.541 D 169 167 3 170 3 0 0 45 115 -14.799 -4.833 -0.052 IL 170 170 3 170 3 1 1 69 140 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 57 ] 61 - u - - - ML 171 170 3 173 3 1 1 55 126 -6.328 -0.036 -6.328 0.525 -1.540 -1.647 0.924 D 172 170 3 173 3 0 0 42 112 -14.799 -4.833 -0.052 IL 173 173 3 173 3 1 1 67 138 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 58 ] 62 - U - - - ML 174 173 3 176 3 1 1 53 123 -6.328 -0.036 -6.328 -2.341 -0.496 -2.567 1.548 D 175 173 3 176 3 0 0 39 109 -14.799 -4.833 -0.052 IL 176 176 3 176 3 1 1 65 136 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 59 ] 63 - U - - - ML 177 176 3 179 3 1 1 50 120 -6.328 -0.036 -6.328 -1.182 -0.659 -0.161 1.023 D 178 176 3 179 3 0 0 34 104 -14.799 -4.833 -0.052 IL 179 179 3 179 3 1 1 64 134 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 60 ] 64 - U - - - ML 180 179 3 182 3 1 1 47 116 -6.328 -0.344 -2.325 -3.225 -2.639 -3.428 1.864 D 181 179 3 182 3 0 0 24 93 -14.799 -4.833 -0.052 IL 182 182 3 182 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 61 ] 65 - U - - - ML 183 182 3 185 2 1 1 1 1 * 0.000 -1.770 -0.193 -1.972 1.366 D 184 182 3 185 2 0 0 0 0 * 0.000 IL 185 185 3 185 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 62 ] - - - - - - E 186 185 3 -1 0 0 0 0 0 // HMMER3/f [3.1b3 | July 2016] NAME CLUST_17 LENG 61 MAXL 130 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Wed Feb 7 22:46:36 2018 COM [1] cmbuild --noss -F selected_tracr_clust/CLUST_17.cm selected_tracr_clust/CLUST_17.aln COM [2] cmbuild --noss -F selected_tracr_clust/CLUST_17.cm selected_tracr_clust/CLUST_17.aln NSEQ 19 EFFN 8.382080 STATS LOCAL MSV -7.8437 0.71892 STATS LOCAL VITERBI -8.7627 0.71892 STATS LOCAL FORWARD -3.5669 0.71892 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.32881 1.68666 1.41363 1.18152 1.38629 1.38629 1.38629 1.38629 0.01057 5.85715 4.87198 0.39730 1.11515 0.00000 * 1 0.02853 4.86351 4.44622 4.74641 - A - - : 1.38629 1.38629 1.38629 1.38629 0.01908 4.66175 4.66175 1.46634 0.26236 1.09861 0.40547 2 0.02853 4.86351 4.44622 4.74641 - A - - : 1.38629 1.38629 1.38629 1.38629 0.01908 4.66175 4.66175 1.46634 0.26236 1.09861 0.40547 3 3.77862 4.66246 0.04470 4.47225 - G - - : 1.38629 1.38629 1.38629 1.38629 0.01908 4.66175 4.66175 1.46634 0.26236 1.09861 0.40547 4 3.77862 4.66245 0.04470 4.47225 - G - - : 1.38629 1.38629 1.38629 1.38629 0.01908 4.66175 4.66175 1.46634 0.26236 1.09861 0.40547 5 0.11105 4.23458 2.61241 4.05898 - A - - : 1.38629 1.38629 1.38629 1.38629 0.01908 4.66175 4.66175 1.46634 0.26236 1.09861 0.40547 6 4.13787 3.67712 4.28191 0.05664 - U - - : 1.38629 1.38629 1.38629 1.38629 0.01908 4.66175 4.66175 1.46634 0.26236 1.09861 0.40547 7 3.72171 2.45404 3.91736 0.13930 - U - - : 1.38629 1.38629 1.38629 1.38629 0.01908 4.66175 4.66175 1.46634 0.26236 1.09861 0.40547 8 0.14509 3.54934 3.77523 2.48433 - A - - : 1.38629 1.38629 1.38629 1.38629 0.01908 4.66175 4.66175 1.46634 0.26236 1.09861 0.40547 9 4.13787 3.67712 4.28191 0.05664 - U - - : 1.38629 1.38629 1.38629 1.38629 0.01908 4.66175 4.66175 1.46634 0.26236 1.09861 0.40547 10 3.67820 2.31945 3.87105 0.15599 - U - - : 1.38629 1.38629 1.38629 1.38629 0.01908 4.66175 4.66175 1.46634 0.26236 1.09861 0.40547 11 4.17989 0.05706 4.36639 3.59471 - C - - : 1.38629 1.38629 1.38629 1.38629 0.01908 4.66175 4.66175 1.46634 0.26236 1.09861 0.40547 12 4.17989 0.05706 4.36639 3.59471 - C - - : 1.38629 1.38629 1.38629 1.38629 0.01908 4.66175 4.66175 1.46634 0.26236 1.09861 0.40547 13 3.77862 4.66246 0.04470 4.47225 - G - - : 1.38629 1.38629 1.38629 1.38629 0.01908 4.66175 4.66175 1.46634 0.26236 1.09861 0.40547 14 4.13787 3.67712 4.28191 0.05664 - U - - : 1.38629 1.38629 1.38629 1.38629 0.01908 4.66175 4.66175 1.46634 0.26236 1.09861 0.40547 15 4.13787 3.67712 4.28191 0.05664 - U - - : 1.38629 1.38629 1.38629 1.38629 0.01908 4.66175 4.66175 1.46634 0.26236 1.09861 0.40547 16 3.77862 4.66246 0.04470 4.47225 - G - - : 1.38629 1.38629 1.38629 1.38629 0.01908 4.66175 4.66175 1.46634 0.26236 1.09861 0.40547 17 4.13787 3.67712 4.28191 0.05664 - U - - : 1.38629 1.38629 1.38629 1.38629 0.01908 4.66175 4.66175 1.46634 0.26236 1.09861 0.40547 18 3.77862 4.66246 0.04470 4.47225 - G - - : 1.38629 1.38629 1.38629 1.38629 0.01908 4.66175 4.66175 1.46634 0.26236 1.09861 0.40547 19 0.14553 3.54745 3.77338 2.48099 - A - - : 1.38629 1.38629 1.38629 1.38629 0.01908 4.66175 4.66175 1.46634 0.26236 1.09861 0.40547 20 0.02853 4.86351 4.44622 4.74641 - A - - : 1.38629 1.38629 1.38629 1.38629 0.01908 4.66175 4.66175 1.46634 0.26236 1.09861 0.40547 21 0.02853 4.86351 4.44622 4.74641 - A - - : 1.38629 1.38629 1.38629 1.38629 0.01908 4.66175 4.66175 1.46634 0.26236 1.09861 0.40547 22 0.02853 4.86351 4.44622 4.74641 - A - - : 1.38629 1.38629 1.38629 1.38629 0.01908 4.66175 4.66175 1.46634 0.26236 1.09861 0.40547 23 4.17989 0.05706 4.36639 3.59471 - C - - : 1.38629 1.38629 1.38629 1.38629 0.01908 4.66175 4.66175 1.46634 0.26236 1.09861 0.40547 24 0.02853 4.86351 4.44622 4.74641 - A - - : 1.38629 1.38629 1.38629 1.38629 0.01908 4.66175 4.66175 1.46634 0.26236 1.09861 0.40547 25 1.65096 2.97170 3.19358 0.33422 - U - - : 1.38629 1.38629 1.38629 1.38629 0.01908 4.66175 4.66175 1.46634 0.26236 1.09861 0.40547 26 1.66660 1.70115 2.60945 0.58867 - U - - : 1.38629 1.38629 1.38629 1.38629 0.01908 4.66175 4.66175 1.46634 0.26236 1.09861 0.40547 27 1.37745 1.47052 2.48777 0.83269 - u - - : 1.38629 1.38629 1.38629 1.38629 0.01908 4.66175 4.66175 1.46634 0.26236 1.09861 0.40547 28 0.24145 3.78107 1.81129 3.56604 - A - - : 1.38629 1.38629 1.38629 1.38629 0.01908 4.66175 4.66175 1.46634 0.26236 1.09861 0.40547 29 1.04673 3.51401 0.54250 3.27419 - G - - : 1.38629 1.38629 1.38629 1.38629 0.01908 4.66175 4.66175 1.46634 0.26236 1.09861 0.40547 30 1.26080 1.84919 1.33038 1.22135 - u - - : 1.38629 1.38629 1.38629 1.38629 0.01908 4.66175 4.66175 1.46634 0.26236 1.09861 0.40547 31 1.93849 2.74850 0.56277 1.50317 - G - - : 1.38629 1.38629 1.38629 1.38629 0.37756 4.66175 1.18739 1.46634 0.26236 1.09861 0.40547 32 2.08435 1.19548 1.21985 1.28094 - c - - : 1.38629 1.38629 1.38629 1.38629 0.02720 4.31139 4.31139 1.46634 0.26236 3.53448 0.02961 33 1.65768 3.23119 0.32874 2.99417 - G - - : 1.38629 1.38629 1.38629 1.38629 0.07123 4.31139 2.89436 1.46634 0.26236 1.75529 0.18978 34 2.64035 2.26811 0.25935 2.92612 - G - - : 1.38629 1.38629 1.38629 1.38629 0.15261 4.33525 2.05230 1.46634 0.26236 0.17174 1.84643 35 3.49696 0.27169 3.69027 1.70016 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02153 4.54213 4.54213 1.46634 0.26236 1.28637 0.32334 36 2.19407 0.40889 3.03919 1.73569 - C - - : 1.38629 1.38629 1.38629 1.38629 0.19759 4.57487 1.77793 1.46634 0.26236 2.46857 0.08851 37 2.46748 0.57708 1.99337 1.52588 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02481 4.40208 4.40208 1.46634 0.26236 0.07637 2.61007 38 1.93048 1.56008 1.85256 0.71751 - u - - : 1.38629 1.38629 1.38629 1.38629 0.57200 0.96869 2.88198 0.99927 0.45910 1.09861 0.40547 39 1.43556 0.88446 1.68525 1.80982 - c - - : 1.38629 1.38629 1.38629 1.38629 0.02002 4.61405 4.61405 1.46634 0.26236 2.07046 0.13482 40 1.67050 2.81105 0.51693 1.86202 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02002 4.61405 4.61405 1.46634 0.26236 0.29069 1.37731 41 1.17019 1.47107 1.93972 1.15116 - u - - : 1.38629 1.38629 1.38629 1.38629 0.01908 4.66175 4.66175 1.46634 0.26236 1.09861 0.40547 42 1.54621 0.90827 1.95713 1.41691 - c - - : 1.38629 1.38629 1.38629 1.38629 0.01908 4.66175 4.66175 1.46634 0.26236 1.09861 0.40547 43 2.40984 1.72316 3.02518 0.38109 - U - - : 1.38629 1.38629 1.38629 1.38629 0.07501 4.66175 2.76762 1.46634 0.26236 1.09861 0.40547 44 1.22186 1.40639 2.41628 0.99145 - u - - : 1.38629 1.38629 1.38629 1.38629 0.02017 4.60691 4.60691 1.46634 0.26236 2.15718 0.12290 45 2.03491 2.16463 0.93132 1.02032 - g - - : 1.38629 1.38629 1.38629 1.38629 0.02017 4.60691 4.60691 1.46634 0.26236 2.15718 0.12290 46 1.23702 0.93522 2.48902 1.45131 - c - - : 1.38629 1.38629 1.38629 1.38629 0.30921 4.60691 1.36261 1.46634 0.26236 2.15718 0.12290 47 0.99440 1.83787 2.22563 1.01363 - a - - : 1.38629 1.38629 1.38629 1.38629 0.02684 4.32454 4.32454 1.46634 0.26236 3.50527 0.03050 48 1.57042 1.13405 1.75290 1.21388 - c - - : 1.38629 1.38629 1.38629 1.38629 0.11859 4.32453 2.31677 1.46634 0.26236 0.47424 0.97381 49 3.29926 2.07005 3.47186 0.21586 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02278 4.48641 4.48641 1.46634 0.26236 2.99665 0.05124 50 1.47636 1.85562 1.26066 1.10350 - u - - : 1.38629 1.38629 1.38629 1.38629 0.07775 4.48641 2.75610 1.46634 0.26236 1.21746 0.35095 51 1.80624 1.19800 1.89982 0.95623 - u - - : 1.38629 1.38629 1.38629 1.38629 0.02271 4.48959 4.48959 1.46634 0.26236 0.97467 0.47372 52 1.89805 1.87151 0.86825 1.28532 - g - - : 1.38629 1.38629 1.38629 1.38629 0.12003 4.55946 2.27651 1.46634 0.26236 2.58695 0.07823 53 1.71328 2.82494 0.45322 2.08074 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02333 4.46276 4.46276 1.46634 0.26236 3.09534 0.04632 54 2.76496 3.32240 0.22939 2.24491 - G - - : 1.38629 1.38629 1.38629 1.38629 0.10190 4.46276 2.46102 1.46634 0.26236 3.09534 0.04632 55 3.37442 4.17890 0.07046 3.99115 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02521 4.38607 4.38607 1.46634 0.26236 3.34978 0.03572 56 2.59799 0.94044 0.80027 2.45443 - g - - : 1.38629 1.38629 1.38629 1.38629 0.02521 4.38607 4.38607 1.46634 0.26236 3.34978 0.03572 57 1.02248 2.45348 2.52767 0.74558 - u - - : 1.38629 1.38629 1.38629 1.38629 0.02521 4.38607 4.38607 1.46634 0.26236 3.34978 0.03572 58 3.00884 1.72988 3.16553 0.31313 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02521 4.38607 4.38607 1.46634 0.26236 3.34978 0.03572 59 2.20565 1.84327 1.49767 0.67753 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02521 4.38607 4.38607 1.46634 0.26236 3.34978 0.03572 60 3.62169 3.21543 3.76226 0.09443 - U - - : 1.38629 1.38629 1.38629 1.38629 0.23829 4.38607 1.61157 1.46634 0.26236 3.34978 0.03572 61 2.61333 1.51987 2.75318 0.43968 - U - - : 1.38629 1.38629 1.38629 1.38629 * 0.00000 * 0.45905 0.99935 0.00000 * // ==> CLUST_18.cm <== INFERNAL1/a [1.1.2 | July 2016] NAME CLUST_18 STATES 202 NODES 68 CLEN 66 W 160 ALPH RNA RF no CONS yes MAP yes DATE Wed Feb 7 22:46:36 2018 COM [1] cmbuild --noss -F selected_tracr_clust/CLUST_18.cm selected_tracr_clust/CLUST_18.aln PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 3 EFFN 3.000000 CKSUM 3510890464 NULL 0.000 0.000 0.000 0.000 EFP7GF -6.6308 0.72102 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 160 261 -7.331 -7.538 -0.434 -2.010 IL 1 1 2 1 4 1 16 162 263 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 16 161 262 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 2 - u - - - ML 3 2 3 5 3 1 17 160 261 -5.369 -0.072 -5.369 0.399 -0.712 -0.707 0.544 D 4 2 3 5 3 0 11 152 253 -13.738 -3.772 -0.110 IL 5 5 3 5 3 1 18 165 267 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 3 - u - - - ML 6 5 3 8 3 1 17 159 260 -5.369 -0.072 -5.369 0.431 -0.713 -0.704 0.514 D 7 5 3 8 3 0 11 151 252 -13.738 -3.772 -0.110 IL 8 8 3 8 3 1 18 164 265 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 4 - u - - - ML 9 8 3 11 3 1 16 158 259 -5.369 -0.072 -5.369 -0.893 0.550 -1.051 0.599 D 10 8 3 11 3 0 11 149 251 -13.738 -3.772 -0.110 IL 11 11 3 11 3 1 18 163 264 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 5 - g - - - ML 12 11 3 14 3 1 16 156 257 -5.369 -0.072 -5.369 -0.642 -0.808 0.518 0.439 D 13 11 3 14 3 0 10 148 249 -13.738 -3.772 -0.110 IL 14 14 3 14 3 1 18 162 263 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 6 - U - - - ML 15 14 3 17 3 1 16 155 256 -5.369 -0.072 -5.369 -1.300 -1.035 -1.438 1.453 D 16 14 3 17 3 0 10 147 248 -13.738 -3.772 -0.110 IL 17 17 3 17 3 1 18 161 262 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 7 - u - - - ML 18 17 3 20 3 1 16 154 255 -5.369 -0.072 -5.369 -0.893 0.550 -1.051 0.599 D 19 17 3 20 3 0 10 146 247 -13.738 -3.772 -0.110 IL 20 20 3 20 3 1 18 159 260 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 8 - C - - - ML 21 20 3 23 3 1 16 153 254 -5.369 -0.072 -5.369 -1.508 1.495 -1.676 -0.951 D 22 20 3 23 3 0 10 145 246 -13.738 -3.772 -0.110 IL 23 23 3 23 3 1 18 158 259 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 9 - U - - - ML 24 23 3 26 3 1 16 151 252 -5.369 -0.072 -5.369 -1.300 -1.035 -1.438 1.453 D 25 23 3 26 3 0 10 144 245 -13.738 -3.772 -0.110 IL 26 26 3 26 3 1 18 157 258 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 10 - U - - - ML 27 26 3 29 3 1 16 150 251 -5.369 -0.072 -5.369 -1.300 -1.035 -1.438 1.453 D 28 26 3 29 3 0 10 142 243 -13.738 -3.772 -0.110 IL 29 29 3 29 3 1 17 156 257 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 11 - U - - - ML 30 29 3 32 3 1 15 149 250 -5.369 -0.072 -5.369 -1.300 -1.035 -1.438 1.453 D 31 29 3 32 3 0 10 141 242 -13.738 -3.772 -0.110 IL 32 32 3 32 3 1 17 155 256 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 12 - U - - - ML 33 32 3 35 3 1 15 148 249 -5.369 -0.072 -5.369 -1.300 -1.035 -1.438 1.453 D 34 32 3 35 3 0 10 140 241 -13.738 -3.772 -0.110 IL 35 35 3 35 3 1 17 153 254 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 12 ] 13 - G - - - ML 36 35 3 38 3 1 15 147 248 -5.369 -0.072 -5.369 -1.411 -2.030 1.623 -1.741 D 37 35 3 38 3 0 9 139 240 -13.738 -3.772 -0.110 IL 38 38 3 38 3 1 17 152 253 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 14 - A - - - ML 39 38 3 41 3 1 15 145 246 -5.369 -0.072 -5.369 1.566 -1.712 -1.443 -1.453 D 40 38 3 41 3 0 9 138 239 -13.738 -3.772 -0.110 IL 41 41 3 41 3 1 17 151 252 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 15 - G - - - ML 42 41 3 44 3 1 15 144 245 -5.369 -0.072 -5.369 -1.411 -2.030 1.623 -1.741 D 43 41 3 44 3 0 9 137 238 -13.738 -3.772 -0.110 IL 44 44 3 44 3 1 17 150 251 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 16 - U - - - ML 45 44 3 47 3 1 15 143 244 -5.369 -0.072 -5.369 -1.300 -1.035 -1.438 1.453 D 46 44 3 47 3 0 9 137 237 -13.738 -3.772 -0.110 IL 47 47 3 47 3 1 16 148 249 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 17 - U - - - ML 48 47 3 50 3 1 14 142 243 -5.369 -0.072 -5.369 -1.300 -1.035 -1.438 1.453 D 49 47 3 50 3 0 9 136 237 -13.738 -3.772 -0.110 IL 50 50 3 50 3 1 16 147 248 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 18 - A - - - ML 51 50 3 53 3 1 14 141 241 -5.369 -0.072 -5.369 1.566 -1.712 -1.443 -1.453 D 52 50 3 53 3 0 9 135 236 -13.738 -3.772 -0.110 IL 53 53 3 53 3 1 15 146 247 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 18 ] 19 - A - - - ML 54 53 3 56 3 1 13 139 240 -5.369 -0.072 -5.369 1.566 -1.712 -1.443 -1.453 D 55 53 3 56 3 0 9 135 236 -13.738 -3.772 -0.110 IL 56 56 3 56 3 1 15 145 246 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 20 - A - - - ML 57 56 3 59 3 1 12 138 239 -5.369 -0.072 -5.369 1.566 -1.712 -1.443 -1.453 D 58 56 3 59 3 0 9 134 235 -13.738 -3.772 -0.110 IL 59 59 3 59 3 1 14 144 244 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 21 - A - - - ML 60 59 3 62 3 1 11 137 238 -5.369 -0.072 -5.369 1.566 -1.712 -1.443 -1.453 D 61 59 3 62 3 0 9 134 235 -13.738 -3.772 -0.110 IL 62 62 3 62 3 1 13 142 243 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 22 - U - - - ML 63 62 3 65 3 1 11 135 236 -5.369 -0.072 -5.369 -1.300 -1.035 -1.438 1.453 D 64 62 3 65 3 0 8 134 235 -13.738 -0.228 -2.772 IL 65 65 3 65 3 1 12 141 242 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 22 ] 23 - A - - - ML 66 65 3 68 3 1 10 134 235 -5.700 -0.057 -5.700 1.769 -2.512 -2.247 -2.276 D 67 65 3 68 3 0 6 131 232 -11.551 -1.585 -0.585 IL 68 68 3 68 3 1 11 140 241 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 24 - u - - - ML 69 68 3 71 3 1 9 133 234 -5.700 -0.057 -5.700 0.244 -0.958 -1.020 0.854 D 70 68 3 71 3 0 6 130 231 -11.551 -1.585 -0.585 IL 71 71 3 71 3 1 10 139 240 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 25 - G - - - ML 72 71 3 74 3 1 8 132 233 -5.700 -0.057 -5.700 -1.931 -2.762 1.770 -2.482 D 73 71 3 74 3 0 5 129 230 -11.551 -1.585 -0.585 IL 74 74 3 74 3 1 10 137 238 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 26 - G - - - ML 75 74 3 77 3 1 7 131 231 -5.700 -0.057 -5.700 -1.931 -2.762 1.770 -2.482 D 76 74 3 77 3 0 5 128 229 -11.551 -1.585 -0.585 IL 77 77 3 77 3 1 9 136 237 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 27 - U - - - ML 78 77 3 80 3 1 6 129 230 -5.700 -0.359 -2.313 -1.919 -1.548 -2.090 1.659 D 79 77 3 80 3 0 4 127 228 -11.551 -1.585 -0.585 IL 80 80 3 80 3 1 9 135 236 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 28 - u - - - ML 81 80 3 83 3 1 6 128 229 -5.411 -0.069 -5.411 0.400 -0.738 -0.741 0.568 D 82 80 3 83 3 0 4 127 228 -13.606 -0.252 -2.640 IL 83 83 3 83 3 1 8 134 235 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 29 - U - - - ML 84 83 3 86 3 1 6 127 228 -5.700 -0.057 -5.700 -1.919 -1.548 -2.090 1.659 D 85 83 3 86 3 0 1 124 225 -11.551 -1.585 -0.585 IL 86 86 3 86 3 1 7 133 234 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 30 - A - - - ML 87 86 3 89 3 1 5 126 227 -5.700 -0.057 -5.700 1.769 -2.512 -2.247 -2.276 D 88 86 3 89 3 0 1 123 224 -11.551 -1.585 -0.585 IL 89 89 3 89 3 1 7 132 232 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 31 - U - - - ML 90 89 3 92 3 1 5 125 226 -5.700 -0.057 -5.700 -1.919 -1.548 -2.090 1.659 D 91 89 3 92 3 0 0 122 223 -11.551 -1.585 -0.585 IL 92 92 3 92 3 1 6 130 231 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 32 - C - - - ML 93 92 3 95 3 1 4 124 224 -5.700 -0.057 -5.700 -2.184 1.697 -2.397 -1.523 D 94 92 3 95 3 0 0 120 221 -11.551 -1.585 -0.585 IL 95 95 3 95 3 1 6 129 230 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 33 - C - - - ML 96 95 3 98 3 1 4 122 223 -5.700 -0.057 -5.700 -2.184 1.697 -2.397 -1.523 D 97 95 3 98 3 0 0 119 220 -11.551 -1.585 -0.585 IL 98 98 3 98 3 1 5 128 229 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 33 ] 34 - a - - - ML 99 98 3 101 3 1 3 121 222 -5.700 -0.057 -5.700 0.786 -1.369 0.478 -1.013 D 100 98 3 101 3 0 0 118 219 -11.551 -1.585 -0.585 IL 101 101 3 101 3 1 5 127 228 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 35 - U - - - ML 102 101 3 104 3 1 3 120 221 -5.700 -0.057 -5.700 -1.919 -1.548 -2.090 1.659 D 103 101 3 104 3 0 0 117 218 -11.551 -1.585 -0.585 IL 104 104 3 104 3 1 4 125 226 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 36 - A - - - ML 105 104 3 107 3 1 3 119 220 -5.700 -0.057 -5.700 1.769 -2.512 -2.247 -2.276 D 106 104 3 107 3 0 0 116 217 -11.551 -1.585 -0.585 IL 107 107 3 107 3 1 4 124 225 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 36 ] 37 - u - - - ML 108 107 3 110 3 1 2 117 218 -5.700 -0.057 -5.700 0.115 -0.833 0.204 0.267 D 109 107 3 110 3 0 0 115 216 -11.551 -1.585 -0.585 IL 110 110 3 110 3 1 3 123 224 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 37 ] 38 - U - - - ML 111 110 3 113 3 1 2 116 217 -5.700 -0.057 -5.700 -1.919 -1.548 -2.090 1.659 D 112 110 3 113 3 0 0 114 215 -11.551 -1.585 -0.585 IL 113 113 3 113 3 1 2 122 223 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 39 - C - - - ML 114 113 3 116 3 1 1 115 216 -5.700 -0.359 -2.313 -2.184 1.697 -2.397 -1.523 D 115 113 3 116 3 0 0 113 214 -11.551 -1.585 -0.585 IL 116 116 3 116 3 1 2 121 222 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 40 - u - - - ML 117 116 3 119 3 1 1 114 215 -5.411 -0.069 -5.411 0.459 -0.740 -0.736 0.513 D 118 116 3 119 3 0 0 112 213 -13.606 -0.252 -2.640 IL 119 119 3 119 3 1 1 120 220 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 41 - A - - - ML 120 119 3 122 3 1 1 113 214 -5.700 -0.057 -5.700 1.769 -2.512 -2.247 -2.276 D 121 119 3 122 3 0 0 109 210 -11.551 -1.585 -0.585 IL 122 122 3 122 3 1 1 118 219 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 41 ] 42 - g - - - ML 123 122 3 125 3 1 1 112 212 -5.700 -0.057 -5.700 -0.999 0.108 0.909 -0.879 D 124 122 3 125 3 0 0 108 209 -11.551 -1.585 -0.585 IL 125 125 3 125 3 1 1 117 218 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 43 - U - - - ML 126 125 3 128 3 1 1 110 211 -5.700 -0.057 -5.700 -1.919 -1.548 -2.090 1.659 D 127 125 3 128 3 0 0 106 206 -11.551 -1.585 -0.585 IL 128 128 3 128 3 1 1 116 217 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 44 - u - - - ML 129 128 3 131 3 1 1 109 210 -5.700 -0.057 -5.700 -1.236 0.271 -1.416 0.996 D 130 128 3 131 3 0 0 102 203 -11.551 -1.585 -0.585 IL 131 131 3 131 3 1 1 115 216 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 45 - a - - - ML 132 131 3 134 3 1 1 108 209 -2.157 -0.403 -5.700 0.786 -1.369 0.478 -1.013 D 133 131 3 134 3 0 0 86 173 -11.551 -1.585 -0.585 IL 134 134 3 134 3 1 2 115 216 -0.264 -2.583 -15.971 0.000 0.000 0.000 0.000 [ MATL 45 ] 52 - U - - - ML 135 134 3 137 3 1 1 87 164 -5.700 -0.057 -5.700 -1.919 -1.548 -2.090 1.659 D 136 134 3 137 3 0 0 84 160 -11.551 -1.585 -0.585 IL 137 137 3 137 3 1 1 95 172 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 53 - G - - - ML 138 137 3 140 3 1 1 86 162 -5.700 -0.057 -5.700 -1.931 -2.762 1.770 -2.482 D 139 137 3 140 3 0 0 82 158 -11.551 -1.585 -0.585 IL 140 140 3 140 3 1 1 94 171 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 47 ] 54 - C - - - ML 141 140 3 143 3 1 1 84 160 -5.700 -0.057 -5.700 -2.184 1.697 -2.397 -1.523 D 142 140 3 143 3 0 0 81 156 -11.551 -1.585 -0.585 IL 143 143 3 143 3 1 1 92 169 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 55 - G - - - ML 144 143 3 146 3 1 1 83 158 -5.700 -0.057 -5.700 -1.931 -2.762 1.770 -2.482 D 145 143 3 146 3 0 0 79 154 -11.551 -1.585 -0.585 IL 146 146 3 146 3 1 1 91 167 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 56 - C - - - ML 147 146 3 149 3 1 1 81 157 -5.700 -0.057 -5.700 -2.184 1.697 -2.397 -1.523 D 148 146 3 149 3 0 0 78 153 -11.551 -1.585 -0.585 IL 149 149 3 149 3 1 1 89 165 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 50 ] 57 - A - - - ML 150 149 3 152 3 1 1 80 155 -5.700 -0.057 -5.700 1.769 -2.512 -2.247 -2.276 D 151 149 3 152 3 0 0 76 151 -11.551 -1.585 -0.585 IL 152 152 3 152 3 1 1 88 164 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 51 ] 58 - C - - - ML 153 152 3 155 3 1 1 78 153 -5.700 -0.057 -5.700 -2.184 1.697 -2.397 -1.523 D 154 152 3 155 3 0 0 74 149 -11.551 -1.585 -0.585 IL 155 155 3 155 3 1 1 86 162 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 52 ] 59 - C - - - ML 156 155 3 158 3 1 1 76 151 -5.700 -0.057 -5.700 -2.184 1.697 -2.397 -1.523 D 157 155 3 158 3 0 0 73 147 -11.551 -1.585 -0.585 IL 158 158 3 158 3 1 1 85 160 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 53 ] 60 - G - - - ML 159 158 3 161 3 1 1 75 149 -5.700 -0.057 -5.700 -1.931 -2.762 1.770 -2.482 D 160 158 3 161 3 0 0 71 145 -11.551 -1.585 -0.585 IL 161 161 3 161 3 1 1 83 158 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 54 ] 61 - A - - - ML 162 161 3 164 3 1 1 73 147 -5.700 -0.057 -5.700 1.769 -2.512 -2.247 -2.276 D 163 161 3 164 3 0 0 69 143 -11.551 -1.585 -0.585 IL 164 164 3 164 3 1 1 82 156 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 55 ] 62 - U - - - ML 165 164 3 167 3 1 1 71 145 -5.700 -0.057 -5.700 -1.919 -1.548 -2.090 1.659 D 166 164 3 167 3 0 0 67 141 -11.551 -1.585 -0.585 IL 167 167 3 167 3 1 1 80 154 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 56 ] 63 - U - - - ML 168 167 3 170 3 1 1 70 143 -5.700 -0.057 -5.700 -1.919 -1.548 -2.090 1.659 D 169 167 3 170 3 0 0 66 138 -11.551 -1.585 -0.585 IL 170 170 3 170 3 1 1 78 153 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 57 ] 64 - C - - - ML 171 170 3 173 3 1 1 68 141 -5.700 -0.057 -5.700 -2.184 1.697 -2.397 -1.523 D 172 170 3 173 3 0 0 64 136 -11.551 -1.585 -0.585 IL 173 173 3 173 3 1 1 77 151 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 58 ] 65 - G - - - ML 174 173 3 176 3 1 1 66 139 -5.700 -0.057 -5.700 -1.931 -2.762 1.770 -2.482 D 175 173 3 176 3 0 0 62 134 -11.551 -1.585 -0.585 IL 176 176 3 176 3 1 1 75 148 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 59 ] 66 - G - - - ML 177 176 3 179 3 1 1 64 136 -5.700 -0.057 -5.700 -1.931 -2.762 1.770 -2.482 D 178 176 3 179 3 0 0 60 131 -11.551 -1.585 -0.585 IL 179 179 3 179 3 1 1 73 146 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 60 ] 67 - U - - - ML 180 179 3 182 3 1 1 62 134 -5.700 -0.057 -5.700 -1.919 -1.548 -2.090 1.659 D 181 179 3 182 3 0 0 57 129 -11.551 -1.585 -0.585 IL 182 182 3 182 3 1 1 72 144 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 61 ] 68 - G - - - ML 183 182 3 185 3 1 1 60 131 -5.700 -0.057 -5.700 -1.931 -2.762 1.770 -2.482 D 184 182 3 185 3 0 0 55 126 -11.551 -1.585 -0.585 IL 185 185 3 185 3 1 1 70 142 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 62 ] 69 - C - - - ML 186 185 3 188 3 1 1 58 129 -5.700 -0.057 -5.700 -2.184 1.697 -2.397 -1.523 D 187 185 3 188 3 0 0 52 123 -11.551 -1.585 -0.585 IL 188 188 3 188 3 1 1 68 140 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 63 ] 70 - U - - - ML 189 188 3 191 3 1 1 55 126 -5.700 -0.057 -5.700 -1.919 -1.548 -2.090 1.659 D 190 188 3 191 3 0 0 49 119 -11.551 -1.585 -0.585 IL 191 191 3 191 3 1 1 66 137 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 64 ] 71 - U - - - ML 192 191 3 194 3 1 1 52 122 -5.700 -0.057 -5.700 -1.919 -1.548 -2.090 1.659 D 193 191 3 194 3 0 0 44 114 -11.551 -1.585 -0.585 IL 194 194 3 194 3 1 1 64 134 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 65 ] 72 - U - - - ML 195 194 3 197 3 1 1 48 117 -5.700 -0.057 -5.700 -1.919 -1.548 -2.090 1.659 D 196 194 3 197 3 0 0 32 101 -11.551 -1.585 -0.585 IL 197 197 3 197 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 66 ] 73 - U - - - ML 198 197 3 200 2 1 1 1 1 * 0.000 -1.919 -1.548 -2.090 1.659 D 199 197 3 200 2 0 0 0 0 * 0.000 IL 200 200 3 200 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 67 ] - - - - - - E 201 200 3 -1 0 0 0 0 0 // HMMER3/f [3.1b3 | July 2016] NAME CLUST_18 LENG 66 MAXL 160 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Wed Feb 7 22:46:36 2018 COM [1] cmbuild --noss -F selected_tracr_clust/CLUST_18.cm selected_tracr_clust/CLUST_18.aln COM [2] cmbuild --noss -F selected_tracr_clust/CLUST_18.cm selected_tracr_clust/CLUST_18.aln NSEQ 3 EFFN 3.000000 STATS LOCAL MSV -8.3214 0.72102 STATS LOCAL VITERBI -8.8399 0.72102 STATS LOCAL FORWARD -3.3625 0.72102 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.46927 1.53009 1.51291 1.09925 1.38629 1.38629 1.38629 1.38629 0.29443 5.08141 1.39097 0.39730 1.11515 0.00000 * 1 1.10943 1.87968 1.87655 1.00923 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04959 3.72180 3.72180 1.46634 0.26236 2.61456 0.07602 2 1.08764 1.88048 1.87458 1.02987 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04959 3.72180 3.72180 1.46634 0.26236 2.61456 0.07602 3 2.00527 1.00519 2.11447 0.97100 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04959 3.72180 3.72180 1.46634 0.26236 2.61456 0.07602 4 1.83154 1.94611 1.02705 1.08192 - g - - : 1.38629 1.38629 1.38629 1.38629 0.04959 3.72180 3.72180 1.46634 0.26236 2.61456 0.07602 5 2.28772 2.10377 2.38296 0.37946 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04959 3.72180 3.72180 1.46634 0.26236 2.61456 0.07602 6 2.00527 1.00519 2.11447 0.97100 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04959 3.72180 3.72180 1.46634 0.26236 2.61456 0.07602 7 2.43124 0.35025 2.54791 2.04552 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04959 3.72180 3.72180 1.46634 0.26236 2.61456 0.07602 8 2.28772 2.10377 2.38296 0.37946 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04959 3.72180 3.72180 1.46634 0.26236 2.61456 0.07602 9 2.28772 2.10377 2.38296 0.37946 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04959 3.72180 3.72180 1.46634 0.26236 2.61456 0.07602 10 2.28772 2.10377 2.38296 0.37946 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04959 3.72180 3.72180 1.46634 0.26236 2.61456 0.07602 11 2.28772 2.10377 2.38296 0.37946 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04959 3.72180 3.72180 1.46634 0.26236 2.61456 0.07602 12 2.36405 2.79351 0.26141 2.59306 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04959 3.72180 3.72180 1.46634 0.26236 2.61456 0.07602 13 0.30053 2.57321 2.38652 2.39322 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04959 3.72180 3.72180 1.46634 0.26236 2.61456 0.07602 14 2.36405 2.79351 0.26141 2.59306 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04959 3.72180 3.72180 1.46634 0.26236 2.61456 0.07602 15 2.28772 2.10377 2.38296 0.37946 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04959 3.72180 3.72180 1.46634 0.26236 2.61456 0.07602 16 2.28772 2.10377 2.38296 0.37946 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04959 3.72180 3.72180 1.46634 0.26236 2.61456 0.07602 17 0.30053 2.57321 2.38652 2.39322 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04959 3.72180 3.72180 1.46634 0.26236 2.61456 0.07602 18 0.30053 2.57321 2.38652 2.39322 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04959 3.72180 3.72180 1.46634 0.26236 2.61456 0.07602 19 0.30053 2.57321 2.38652 2.39322 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04959 3.72180 3.72180 1.46634 0.26236 2.61456 0.07602 20 0.30053 2.57321 2.38652 2.39322 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04959 3.72180 3.72180 1.46634 0.26236 2.61456 0.07602 21 2.28772 2.10377 2.38296 0.37946 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04959 3.72180 3.72180 1.46634 0.26236 0.15829 1.92141 22 0.16029 3.12721 2.94402 2.96400 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 1.21711 2.05060 2.09296 0.79422 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.72479 3.30093 0.15917 3.10680 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.72479 3.30093 0.15917 3.10680 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 2.71655 2.45957 2.83486 0.23610 - U - - : 1.38629 1.38629 1.38629 1.38629 0.24907 3.95124 1.60323 1.46634 0.26236 1.09861 0.40547 27 1.10885 1.89817 1.89998 0.99251 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04816 3.75033 3.75033 1.46634 0.26236 0.17489 1.82976 28 2.71655 2.45957 2.83486 0.23610 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 0.16029 3.12721 2.94402 2.96400 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.71655 2.45957 2.83486 0.23610 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.89989 0.21012 3.04772 2.44162 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 2.89989 0.21012 3.04772 2.44162 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 0.84145 2.33499 1.05496 2.08829 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 2.71655 2.45957 2.83486 0.23610 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 0.16029 3.12721 2.94402 2.96400 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 1.30653 1.96338 1.24492 1.20100 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 37 2.71655 2.45957 2.83486 0.23610 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 38 2.89989 0.21012 3.04772 2.44162 - C - - : 1.38629 1.38629 1.38629 1.38629 0.24907 3.95124 1.60323 1.46634 0.26236 1.09861 0.40547 39 1.06832 1.89957 1.89660 1.03084 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04816 3.75033 3.75033 1.46634 0.26236 0.17489 1.82976 40 0.16029 3.12721 2.94402 2.96400 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.07892 1.31130 0.75610 1.99532 - g - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 2.71655 2.45957 2.83486 0.23610 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 2.24314 1.19844 2.36755 0.69615 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 0.84145 2.33499 1.05496 2.08829 - a - - : 1.38629 1.38629 1.38629 1.38629 0.27903 1.49498 3.95124 1.79020 0.18263 1.09861 0.40547 45 2.71655 2.45957 2.83486 0.23610 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 46 2.72479 3.30093 0.15917 3.10680 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 47 2.89989 0.21012 3.04772 2.44162 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 48 2.72479 3.30093 0.15917 3.10680 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 49 2.89989 0.21012 3.04772 2.44162 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 50 0.16029 3.12721 2.94402 2.96400 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 51 2.89989 0.21012 3.04772 2.44162 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 52 2.89989 0.21012 3.04772 2.44162 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 53 2.72479 3.30093 0.15917 3.10680 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 54 0.16029 3.12721 2.94402 2.96400 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 55 2.71655 2.45957 2.83486 0.23610 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 56 2.71655 2.45957 2.83486 0.23610 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 57 2.89989 0.21012 3.04772 2.44162 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 58 2.72479 3.30093 0.15917 3.10680 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 59 2.72479 3.30093 0.15917 3.10680 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 60 2.71655 2.45957 2.83486 0.23610 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 61 2.72479 3.30093 0.15917 3.10680 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 62 2.89989 0.21012 3.04772 2.44162 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 63 2.71655 2.45957 2.83486 0.23610 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 64 2.71655 2.45957 2.83486 0.23610 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 65 2.71655 2.45957 2.83486 0.23610 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 66 2.71655 2.45957 2.83486 0.23610 - U - - : 1.38629 1.38629 1.38629 1.38629 * 0.00000 * 0.45905 0.99935 0.00000 * // ==> CLUST_19.cm <== INFERNAL1/a [1.1.2 | July 2016] NAME CLUST_19 STATES 166 NODES 56 CLEN 54 W 131 ALPH RNA RF no CONS yes MAP yes DATE Wed Feb 7 22:46:36 2018 COM [1] cmbuild --noss -F selected_tracr_clust/CLUST_19.cm selected_tracr_clust/CLUST_19.aln PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 8 EFFN 5.144531 CKSUM 1948087207 NULL 0.000 0.000 0.000 0.000 EFP7GF -11.8982 0.71908 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 131 216 -7.884 -8.091 -0.028 -6.505 IL 1 1 2 1 4 1 17 134 218 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 17 133 218 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 1 17 132 216 -6.199 -0.040 -6.199 1.909 -3.810 -3.435 -3.619 D 4 2 3 5 3 0 12 129 213 -11.551 -1.585 -0.585 IL 5 5 3 5 3 1 18 138 223 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - A - - - ML 6 5 3 8 3 1 16 130 215 -6.199 -0.040 -6.199 1.909 -3.810 -3.435 -3.619 D 7 5 3 8 3 0 11 127 212 -11.551 -1.585 -0.585 IL 8 8 3 8 3 1 18 137 222 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - G - - - ML 9 8 3 11 3 1 16 129 214 -6.199 -0.040 -6.199 -2.679 -3.787 1.881 -3.516 D 10 8 3 11 3 0 10 126 210 -11.551 -1.585 -0.585 IL 11 11 3 11 3 1 17 136 221 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - G - - - ML 12 11 3 14 3 1 15 128 212 -6.199 -0.040 -6.199 -2.679 -3.787 1.881 -3.516 D 13 11 3 14 3 0 10 125 209 -11.551 -1.585 -0.585 IL 14 14 3 14 3 1 16 135 219 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - C - - - ML 15 14 3 17 3 1 14 127 211 -6.199 -0.040 -6.199 -3.175 1.850 -3.430 -2.382 D 16 14 3 17 3 0 9 124 208 -11.551 -1.585 -0.585 IL 17 17 3 17 3 1 16 133 218 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - U - - - ML 18 17 3 20 3 1 14 126 210 -6.199 -0.040 -6.199 -0.391 -1.594 -1.824 1.392 D 19 17 3 20 3 0 8 123 207 -11.551 -1.585 -0.585 IL 20 20 3 20 3 1 15 132 217 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - A - - - ML 21 20 3 23 3 1 13 124 208 -6.199 -0.040 -6.199 1.453 -2.254 -0.344 -1.920 D 22 20 3 23 3 0 8 121 205 -11.551 -1.585 -0.585 IL 23 23 3 23 3 1 14 131 216 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - U - - - ML 24 23 3 26 3 1 12 123 207 -6.199 -0.040 -6.199 -2.961 -2.414 -3.159 1.837 D 25 23 3 26 3 0 7 120 204 -11.551 -1.585 -0.585 IL 26 26 3 26 3 1 14 130 214 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - A - - - ML 27 26 3 29 3 1 12 122 206 -6.199 -0.040 -6.199 1.909 -3.810 -3.435 -3.619 D 28 26 3 29 3 0 7 119 203 -11.551 -1.585 -0.585 IL 29 29 3 29 3 1 13 129 213 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - U - - - ML 30 29 3 32 3 1 11 121 204 -2.938 -0.224 -6.199 0.119 -1.456 -1.591 1.149 D 31 29 3 32 3 0 6 117 201 -11.551 -1.585 -0.585 IL 32 32 3 32 3 1 12 122 205 -0.989 -1.012 -14.089 0.000 0.000 0.000 0.000 [ MATL 11 ] 13 - G - - - ML 33 32 3 35 3 1 10 119 203 -6.199 -0.040 -6.199 -2.679 -3.787 1.881 -3.516 D 34 32 3 35 3 0 5 116 200 -11.551 -1.585 -0.585 IL 35 35 3 35 3 1 12 126 210 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 12 ] 14 - C - - - ML 36 35 3 38 3 1 10 118 202 -6.199 -0.040 -6.199 -3.175 1.850 -3.430 -2.382 D 37 35 3 38 3 0 5 115 199 -11.551 -1.585 -0.585 IL 38 38 3 38 3 1 11 125 209 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 15 - C - - - ML 39 38 3 41 3 1 9 117 201 -6.199 -0.040 -6.199 -3.175 1.850 -3.430 -2.382 D 40 38 3 41 3 0 4 114 197 -11.551 -1.585 -0.585 IL 41 41 3 41 3 1 10 123 208 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 16 - G - - - ML 42 41 3 44 3 1 8 116 199 -6.199 -0.040 -6.199 -2.679 -3.787 1.881 -3.516 D 43 41 3 44 3 0 4 113 196 -11.551 -1.585 -0.585 IL 44 44 3 44 3 1 10 122 206 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 17 - u - - - ML 45 44 3 47 3 1 8 114 198 -6.199 -0.040 -6.199 0.478 -1.402 -1.496 0.906 D 46 44 3 47 3 0 3 111 195 -11.551 -1.585 -0.585 IL 47 47 3 47 3 1 9 121 205 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 18 - A - - - ML 48 47 3 50 3 1 7 113 197 -6.199 -0.040 -6.199 1.909 -3.810 -3.435 -3.619 D 49 47 3 50 3 0 3 110 194 -11.551 -1.585 -0.585 IL 50 50 3 50 3 1 8 120 204 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 19 - G - - - ML 51 50 3 53 3 1 6 112 195 -6.199 -0.040 -6.199 -2.679 -3.787 1.881 -3.516 D 52 50 3 53 3 0 2 109 192 -11.551 -1.585 -0.585 IL 53 53 3 53 3 1 7 119 203 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 18 ] 20 - a - - - ML 54 53 3 56 3 1 5 111 194 -6.199 -0.040 -6.199 0.844 -2.027 0.719 -1.672 D 55 53 3 56 3 0 2 108 191 -11.551 -1.585 -0.585 IL 56 56 3 56 3 1 6 117 201 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 21 - u - - - ML 57 56 3 59 3 1 4 109 193 -6.199 -0.040 -6.199 -0.010 -0.597 -1.249 0.945 D 58 56 3 59 3 0 2 107 190 -11.551 -1.585 -0.585 IL 59 59 3 59 3 1 5 116 200 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 22 - G - - - ML 60 59 3 62 3 1 3 108 191 -6.199 -0.380 -2.200 -0.198 -2.526 1.451 -2.180 D 61 59 3 62 3 0 1 106 189 -11.551 -1.585 -0.585 IL 62 62 3 62 3 1 5 115 199 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 23 - u - - - ML 63 62 3 65 3 1 3 107 191 -5.869 -0.179 -3.328 0.261 -1.102 -1.180 0.922 D 64 62 3 65 3 0 1 104 188 -14.135 -4.169 -0.083 IL 65 65 3 65 3 1 5 114 198 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 22 ] 24 - u - - - ML 66 65 3 68 3 1 3 106 189 -5.745 -0.055 -5.745 0.356 -0.986 -1.040 0.790 D 67 65 3 68 3 0 1 104 188 -14.477 -0.132 -3.512 IL 68 68 3 68 3 1 4 113 196 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 25 - A - - - ML 69 68 3 71 3 1 2 105 188 -6.199 -0.040 -6.199 1.477 -0.650 -2.036 -1.578 D 70 68 3 71 3 0 0 102 185 -11.551 -1.585 -0.585 IL 71 71 3 71 3 1 3 111 195 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 26 - A - - - ML 72 71 3 74 3 1 1 103 186 -3.281 -0.383 -2.938 1.909 -3.810 -3.435 -3.619 D 73 71 3 74 3 0 0 101 184 -11.551 -1.585 -0.585 IL 74 74 3 74 3 1 2 103 187 -5.091 -0.043 -12.735 0.000 0.000 0.000 0.000 [ MATL 25 ] 28 - A - - - ML 75 74 3 77 3 1 1 102 186 -6.019 -0.045 -6.019 1.015 -1.290 -1.356 0.239 D 76 74 3 77 3 0 0 101 184 -13.500 -0.274 -2.534 IL 77 77 3 77 3 1 2 109 193 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 29 - a - - - ML 78 77 3 80 3 1 1 101 184 -6.199 -0.040 -6.199 0.835 -1.133 -0.538 0.099 D 79 77 3 80 3 0 0 98 181 -11.551 -1.585 -0.585 IL 80 80 3 80 3 1 2 108 191 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 30 - U - - - ML 81 80 3 83 3 1 1 100 183 -6.199 -0.040 -6.199 -1.911 0.587 -2.115 1.001 D 82 80 3 83 3 0 0 97 180 -11.551 -1.585 -0.585 IL 83 83 3 83 3 1 1 107 190 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 31 - C - - - ML 84 83 3 86 3 1 1 99 182 -6.199 -0.040 -6.199 -3.175 1.850 -3.430 -2.382 D 85 83 3 86 3 0 0 95 178 -11.551 -1.585 -0.585 IL 86 86 3 86 3 1 1 105 189 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 32 - U - - - ML 87 86 3 89 3 1 1 97 180 -6.199 -0.040 -6.199 -2.961 -2.414 -3.159 1.837 D 88 86 3 89 3 0 0 94 177 -11.551 -1.585 -0.585 IL 89 89 3 89 3 1 1 104 188 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 33 - u - - - ML 90 89 3 92 3 1 1 96 179 -6.199 -0.040 -6.199 0.330 -1.089 -0.433 0.615 D 91 89 3 92 3 0 0 93 176 -11.551 -1.585 -0.585 IL 92 92 3 92 3 1 1 103 186 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 34 - u - - - ML 93 92 3 95 3 1 1 95 178 -6.199 -0.040 -6.199 -0.516 -1.153 -0.195 0.983 D 94 92 3 95 3 0 0 92 175 -11.551 -1.585 -0.585 IL 95 95 3 95 3 1 1 102 185 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 35 - A - - - ML 96 95 3 98 3 1 1 93 176 -6.199 -0.040 -6.199 1.909 -3.810 -3.435 -3.619 D 97 95 3 98 3 0 0 90 173 -11.551 -1.585 -0.585 IL 98 98 3 98 3 1 1 100 184 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 33 ] 36 - g - - - ML 99 98 3 101 3 1 1 92 175 -6.199 -0.040 -6.199 -1.556 0.427 0.953 -1.400 D 100 98 3 101 3 0 0 89 172 -11.551 -1.585 -0.585 IL 101 101 3 101 3 1 1 99 182 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 37 - U - - - ML 102 101 3 104 3 1 1 91 174 -6.199 -0.040 -6.199 -2.961 -2.414 -3.159 1.837 D 103 101 3 104 3 0 0 88 170 -11.551 -1.585 -0.585 IL 104 104 3 104 3 1 1 98 181 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 38 - C - - - ML 105 104 3 107 3 1 1 90 172 -6.199 -0.040 -6.199 -3.175 1.850 -3.430 -2.382 D 106 104 3 107 3 0 0 86 169 -11.551 -1.585 -0.585 IL 107 107 3 107 3 1 1 97 180 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 36 ] 39 - C - - - ML 108 107 3 110 3 1 1 88 171 -6.199 -0.040 -6.199 -3.175 1.850 -3.430 -2.382 D 109 107 3 110 3 0 0 85 167 -11.551 -1.585 -0.585 IL 110 110 3 110 3 1 1 95 178 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 37 ] 40 - U - - - ML 111 110 3 113 3 1 1 87 170 -6.199 -0.040 -6.199 -1.911 0.518 -2.115 1.050 D 112 110 3 113 3 0 0 83 165 -11.551 -1.585 -0.585 IL 113 113 3 113 3 1 1 94 177 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 41 - G - - - ML 114 113 3 116 3 1 1 86 168 -6.199 -0.040 -6.199 -2.679 -3.787 1.881 -3.516 D 115 113 3 116 3 0 0 80 162 -11.551 -1.585 -0.585 IL 116 116 3 116 3 1 1 93 176 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 42 - C - - - ML 117 116 3 119 3 1 1 85 167 -2.704 -0.264 -6.199 -3.175 1.850 -3.430 -2.382 D 118 116 3 119 3 0 0 72 146 -11.551 -1.585 -0.585 IL 119 119 3 119 3 1 2 92 175 -0.322 -2.321 -15.655 0.000 0.000 0.000 0.000 [ MATL 40 ] 48 - U - - - ML 120 119 3 122 3 1 1 74 147 -6.199 -0.040 -6.199 -2.961 -2.414 -3.159 1.837 D 121 119 3 122 3 0 0 70 143 -11.551 -1.585 -0.585 IL 122 122 3 122 3 1 1 83 157 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 41 ] 49 - U - - - ML 123 122 3 125 3 1 1 72 145 -6.199 -0.040 -6.199 -2.961 -2.414 -3.159 1.837 D 124 122 3 125 3 0 0 69 141 -11.551 -1.585 -0.585 IL 125 125 3 125 3 1 1 81 155 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 50 - C - - - ML 126 125 3 128 3 1 1 71 144 -6.199 -0.040 -6.199 -3.175 1.850 -3.430 -2.382 D 127 125 3 128 3 0 0 67 139 -11.551 -1.585 -0.585 IL 128 128 3 128 3 1 1 80 154 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 51 - G - - - ML 129 128 3 131 3 1 1 69 142 -6.199 -0.040 -6.199 -1.641 -0.486 1.418 -1.772 D 130 128 3 131 3 0 0 65 137 -11.551 -1.585 -0.585 IL 131 131 3 131 3 1 1 78 152 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 52 - G - - - ML 132 131 3 134 3 1 1 67 140 -6.199 -0.040 -6.199 -2.679 -3.787 1.881 -3.516 D 133 131 3 134 3 0 0 63 135 -11.551 -1.585 -0.585 IL 134 134 3 134 3 1 1 77 150 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 53 - U - - - ML 135 134 3 137 3 1 1 66 138 -6.199 -0.040 -6.199 -2.961 -2.414 -3.159 1.837 D 136 134 3 137 3 0 0 62 133 -11.551 -1.585 -0.585 IL 137 137 3 137 3 1 1 75 148 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 54 - G - - - ML 138 137 3 140 3 1 1 64 136 -6.199 -0.040 -6.199 -0.403 -2.636 1.525 -2.294 D 139 137 3 140 3 0 0 60 131 -11.551 -1.585 -0.585 IL 140 140 3 140 3 1 1 74 146 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 47 ] 55 - G - - - ML 141 140 3 143 3 1 1 62 134 -6.199 -0.040 -6.199 -2.679 -3.787 1.881 -3.516 D 142 140 3 143 3 0 0 58 129 -11.551 -1.585 -0.585 IL 143 143 3 143 3 1 1 72 144 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 56 - G - - - ML 144 143 3 146 3 1 1 60 131 -6.199 -0.040 -6.199 -2.679 -3.787 1.881 -3.516 D 145 143 3 146 3 0 0 56 126 -11.551 -1.585 -0.585 IL 146 146 3 146 3 1 1 71 143 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 57 - A - - - ML 147 146 3 149 3 1 1 58 129 -6.199 -0.040 -6.199 1.909 -3.810 -3.435 -3.619 D 148 146 3 149 3 0 0 53 124 -11.551 -1.585 -0.585 IL 149 149 3 149 3 1 1 69 141 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 50 ] 58 - c - - - ML 150 149 3 152 3 1 1 56 126 -6.199 -0.040 -6.199 -1.611 0.885 0.519 -1.349 D 151 149 3 152 3 0 0 51 121 -11.551 -1.585 -0.585 IL 152 152 3 152 3 1 1 67 138 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 51 ] 59 - U - - - ML 153 152 3 155 3 1 1 54 124 -6.199 -0.040 -6.199 -2.961 -2.414 -3.159 1.837 D 154 152 3 155 3 0 0 48 117 -11.551 -1.585 -0.585 IL 155 155 3 155 3 1 1 66 136 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 52 ] 60 - U - - - ML 156 155 3 158 3 1 1 51 120 -6.199 -0.040 -6.199 -2.961 -2.414 -3.159 1.837 D 157 155 3 158 3 0 0 43 112 -11.551 -1.585 -0.585 IL 158 158 3 158 3 1 1 64 134 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 53 ] 61 - U - - - ML 159 158 3 161 3 1 1 47 116 -6.199 -0.040 -6.199 -0.225 -1.543 -1.739 1.323 D 160 158 3 161 3 0 0 32 101 -11.551 -1.585 -0.585 IL 161 161 3 161 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 54 ] 62 - U - - - ML 162 161 3 164 2 1 1 1 1 * 0.000 -1.913 0.451 -2.117 1.095 D 163 161 3 164 2 0 0 0 0 * 0.000 IL 164 164 3 164 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 55 ] - - - - - - E 165 164 3 -1 0 0 0 0 0 // HMMER3/f [3.1b3 | July 2016] NAME CLUST_19 LENG 54 MAXL 131 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Wed Feb 7 22:46:36 2018 COM [1] cmbuild --noss -F selected_tracr_clust/CLUST_19.cm selected_tracr_clust/CLUST_19.aln COM [2] cmbuild --noss -F selected_tracr_clust/CLUST_19.cm selected_tracr_clust/CLUST_19.aln NSEQ 8 EFFN 5.144531 STATS LOCAL MSV -7.1893 0.71908 STATS LOCAL VITERBI -8.1352 0.71908 STATS LOCAL FORWARD -3.5349 0.71908 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.39407 1.52736 1.35137 1.28756 1.38629 1.38629 1.38629 1.38629 0.01570 5.46468 4.47951 0.39730 1.11515 0.00000 * 1 0.06324 4.02738 3.76709 3.89489 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 2 0.06324 4.02738 3.76709 3.89488 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 3 3.24357 4.01125 0.08229 3.82329 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 4 3.24357 4.01125 0.08229 3.82329 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 5 3.58686 0.10406 3.76373 3.03760 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 6 1.65728 2.49086 2.65071 0.42174 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 7 0.37910 2.94840 1.62444 2.71694 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 8 3.43847 3.05923 3.57618 0.11319 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 9 0.06324 4.02738 3.76709 3.89488 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 10 1.30364 2.39523 2.48884 0.59005 - U - - : 1.38629 1.38629 1.38629 1.38629 0.15561 2.03644 4.29654 0.70121 0.68515 1.09861 0.40547 11 3.24357 4.01125 0.08229 3.82329 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 12 3.58686 0.10406 3.76373 3.03760 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 13 3.58686 0.10406 3.76373 3.03760 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 14 3.24357 4.01125 0.08229 3.82329 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 15 1.05463 2.35785 2.42331 0.75837 - u - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 16 0.06324 4.02738 3.76709 3.89488 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 17 3.24357 4.01125 0.08229 3.82329 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 18 0.80116 2.79130 0.88820 2.54525 - a - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 19 1.39354 1.79978 2.25199 0.73131 - u - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 20 1.52369 3.13709 0.38051 2.89724 - G - - : 1.38629 1.38629 1.38629 1.38629 0.26307 4.29654 1.52464 1.46634 0.26236 1.09861 0.40547 21 1.20554 2.14987 2.20387 0.74740 - u - - : 1.38629 1.38629 1.38629 1.38629 0.12408 4.06828 2.30679 1.46634 0.26236 2.88976 0.05719 22 1.13971 2.06988 2.10684 0.83872 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03800 3.98220 3.98220 1.46634 0.26236 0.09176 2.43406 23 0.36239 1.83688 2.79743 2.48038 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 24 0.06324 4.02738 3.76709 3.89489 - A - - : 1.38629 1.38629 1.38629 1.38629 0.26578 2.27397 2.03644 0.02977 3.52897 1.09861 0.40547 25 0.68307 2.28018 2.32613 1.22079 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03132 4.17225 4.17225 1.46634 0.26236 0.18953 1.75648 26 0.80718 2.17150 1.75945 1.31774 - a - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 27 2.71092 0.97920 2.85237 0.69274 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 28 3.58686 0.10406 3.76373 3.03760 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 29 3.43847 3.05923 3.57618 0.11319 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 30 1.15747 2.14129 1.68625 0.95971 - u - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 31 1.74377 2.18537 1.52112 0.70474 - u - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 32 0.06324 4.02738 3.76709 3.89489 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 33 2.46498 1.09004 0.72562 2.35639 - g - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 34 3.43847 3.05923 3.57618 0.11319 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 35 3.58686 0.10406 3.76373 3.03760 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 36 3.58686 0.10406 3.76373 3.03760 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 37 2.71068 1.02710 2.85206 0.65828 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 38 3.24357 4.01125 0.08229 3.82329 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 39 3.58686 0.10406 3.76373 3.03760 - C - - : 1.38629 1.38629 1.38629 1.38629 0.18276 1.87460 4.29654 1.60866 0.22334 1.09861 0.40547 40 3.43847 3.05923 3.57618 0.11319 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 41 3.43847 3.05923 3.57618 0.11319 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 42 3.58686 0.10406 3.76373 3.03760 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 43 2.52371 1.72286 0.40334 2.61459 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 44 3.24357 4.01125 0.08229 3.82329 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 45 3.43847 3.05923 3.57618 0.11319 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 46 1.66555 3.21309 0.32893 2.97612 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 47 3.24357 4.01125 0.08229 3.82329 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 48 3.24357 4.01125 0.08229 3.82329 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 49 0.06324 4.02738 3.76709 3.89489 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 50 2.50293 0.77286 1.02634 2.32127 - c - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 51 3.43847 3.05923 3.57618 0.11319 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 52 3.43847 3.05923 3.57618 0.11319 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 53 1.54199 2.45604 2.59140 0.46943 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02761 4.29654 4.29654 1.46634 0.26236 1.09861 0.40547 54 2.71229 1.07360 2.85372 0.62697 - U - - : 1.38629 1.38629 1.38629 1.38629 * 0.00000 * 0.45905 0.99936 0.00000 * // ==> CLUST_20.cm <== INFERNAL1/a [1.1.2 | July 2016] NAME CLUST_20 STATES 172 NODES 58 CLEN 56 W 134 ALPH RNA RF no CONS yes MAP yes DATE Wed Feb 7 22:46:36 2018 COM [1] cmbuild --noss -F selected_tracr_clust/CLUST_20.cm selected_tracr_clust/CLUST_20.aln PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 3 EFFN 3.000000 CKSUM 14917459 NULL 0.000 0.000 0.000 0.000 EFP7GF -7.7621 0.72404 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 134 217 -7.331 -7.538 -0.041 -5.952 IL 1 1 2 1 4 1 16 137 219 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 16 136 219 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 1 15 135 217 -5.700 -0.057 -5.700 1.769 -2.512 -2.247 -2.276 D 4 2 3 5 3 0 11 131 214 -11.551 -1.585 -0.585 IL 5 5 3 5 3 1 17 141 225 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - A - - - ML 6 5 3 8 3 1 15 133 216 -5.700 -0.057 -5.700 1.769 -2.512 -2.247 -2.276 D 7 5 3 8 3 0 10 130 212 -11.551 -1.585 -0.585 IL 8 8 3 8 3 1 16 140 223 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - G - - - ML 9 8 3 11 3 1 14 132 214 -5.700 -0.057 -5.700 -1.931 -2.762 1.770 -2.482 D 10 8 3 11 3 0 9 129 211 -11.551 -1.585 -0.585 IL 11 11 3 11 3 1 16 139 222 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - G - - - ML 12 11 3 14 3 1 13 131 213 -5.700 -0.057 -5.700 -1.931 -2.762 1.770 -2.482 D 13 11 3 14 3 0 9 127 209 -11.551 -1.585 -0.585 IL 14 14 3 14 3 1 15 137 220 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - C - - - ML 15 14 3 17 3 1 13 129 211 -5.700 -0.057 -5.700 -2.184 1.697 -2.397 -1.523 D 16 14 3 17 3 0 8 126 208 -11.551 -1.585 -0.585 IL 17 17 3 17 3 1 14 136 219 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - a - - - ML 18 17 3 20 3 1 12 128 210 -5.700 -0.057 -5.700 0.826 -1.366 0.425 -1.011 D 19 17 3 20 3 0 7 125 206 -11.551 -1.585 -0.585 IL 20 20 3 20 3 1 14 135 217 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - U - - - ML 21 20 3 23 3 1 12 127 208 -5.700 -0.057 -5.700 -1.919 -1.548 -2.090 1.659 D 22 20 3 23 3 0 7 123 205 -11.551 -1.585 -0.585 IL 23 23 3 23 3 1 13 133 216 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - u - - - ML 24 23 3 26 3 1 11 125 207 -5.700 -0.057 -5.700 0.202 -0.963 -1.029 0.885 D 25 23 3 26 3 0 6 122 203 -11.551 -1.585 -0.585 IL 26 26 3 26 3 1 12 132 214 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - A - - - ML 27 26 3 29 3 1 10 124 205 -5.700 -0.057 -5.700 1.769 -2.512 -2.247 -2.276 D 28 26 3 29 3 0 6 121 202 -11.551 -1.585 -0.585 IL 29 29 3 29 3 1 12 131 213 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - A - - - ML 30 29 3 32 3 1 10 123 204 -5.700 -0.057 -5.700 1.769 -2.512 -2.247 -2.276 D 31 29 3 32 3 0 5 119 200 -11.551 -1.585 -0.585 IL 32 32 3 32 3 1 11 129 211 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - G - - - ML 33 32 3 35 3 1 9 121 202 -5.700 -0.057 -5.700 -1.931 -2.762 1.770 -2.482 D 34 32 3 35 3 0 4 118 199 -11.551 -1.585 -0.585 IL 35 35 3 35 3 1 11 128 210 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - C - - - ML 36 35 3 38 3 1 8 120 201 -5.700 -0.057 -5.700 -2.184 1.697 -2.397 -1.523 D 37 35 3 38 3 0 4 117 197 -11.551 -1.585 -0.585 IL 38 38 3 38 3 1 10 127 208 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - C - - - ML 39 38 3 41 3 1 8 119 199 -5.700 -0.057 -5.700 -2.184 1.697 -2.397 -1.523 D 40 38 3 41 3 0 3 115 196 -11.551 -1.585 -0.585 IL 41 41 3 41 3 1 9 125 207 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - G - - - ML 42 41 3 44 3 1 7 117 198 -5.700 -0.057 -5.700 -1.931 -2.762 1.770 -2.482 D 43 41 3 44 3 0 3 114 194 -11.551 -1.585 -0.585 IL 44 44 3 44 3 1 9 124 205 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - U - - - ML 45 44 3 47 3 1 7 116 196 -5.700 -0.057 -5.700 -1.919 -1.548 -2.090 1.659 D 46 44 3 47 3 0 2 113 193 -11.551 -1.585 -0.585 IL 47 47 3 47 3 1 8 123 204 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - A - - - ML 48 47 3 50 3 1 6 114 195 -5.700 -0.057 -5.700 1.769 -2.512 -2.247 -2.276 D 49 47 3 50 3 0 2 111 191 -11.551 -1.585 -0.585 IL 50 50 3 50 3 1 8 121 202 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - A - - - ML 51 50 3 53 3 1 6 113 193 -5.700 -0.057 -5.700 1.769 -2.512 -2.247 -2.276 D 52 50 3 53 3 0 1 110 189 -11.551 -1.585 -0.585 IL 53 53 3 53 3 1 7 120 201 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - a - - - ML 54 53 3 56 3 1 5 112 192 -5.700 -0.057 -5.700 0.800 -1.368 0.460 -1.012 D 55 53 3 56 3 0 1 108 188 -11.551 -1.585 -0.585 IL 56 56 3 56 3 1 7 119 199 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - G - - - ML 57 56 3 59 3 1 5 110 190 -5.700 -0.057 -5.700 -1.931 -2.762 1.770 -2.482 D 58 56 3 59 3 0 0 107 186 -11.551 -1.585 -0.585 IL 59 59 3 59 3 1 6 117 198 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 20 - U - - - ML 60 59 3 62 3 1 4 109 188 -5.700 -0.057 -5.700 -1.919 -1.548 -2.090 1.659 D 61 59 3 62 3 0 0 106 185 -11.551 -1.585 -0.585 IL 62 62 3 62 3 1 6 116 196 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 21 - A - - - ML 63 62 3 65 3 1 4 108 187 -5.700 -0.057 -5.700 1.769 -2.512 -2.247 -2.276 D 64 62 3 65 3 0 0 104 183 -11.551 -1.585 -0.585 IL 65 65 3 65 3 1 5 115 195 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 22 ] 22 - U - - - ML 66 65 3 68 3 1 3 106 185 -5.700 -0.057 -5.700 -1.919 -1.548 -2.090 1.659 D 67 65 3 68 3 0 0 103 182 -11.551 -1.585 -0.585 IL 68 68 3 68 3 1 5 113 193 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 23 - C - - - ML 69 68 3 71 3 1 3 105 184 -5.700 -0.057 -5.700 -2.184 1.697 -2.397 -1.523 D 70 68 3 71 3 0 0 101 180 -11.551 -1.585 -0.585 IL 71 71 3 71 3 1 4 112 192 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 24 - C - - - ML 72 71 3 74 3 1 2 103 182 -5.700 -0.057 -5.700 -2.184 1.697 -2.397 -1.523 D 73 71 3 74 3 0 0 100 178 -11.551 -1.585 -0.585 IL 74 74 3 74 3 1 4 110 190 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 25 - C - - - ML 75 74 3 77 3 1 2 102 180 -5.700 -0.057 -5.700 -2.184 1.697 -2.397 -1.523 D 76 74 3 77 3 0 0 99 177 -11.551 -1.585 -0.585 IL 77 77 3 77 3 1 3 109 188 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 26 - C - - - ML 78 77 3 80 3 1 2 100 179 -5.700 -0.057 -5.700 -2.184 1.697 -2.397 -1.523 D 79 77 3 80 3 0 0 97 175 -11.551 -1.585 -0.585 IL 80 80 3 80 3 1 3 108 187 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 27 - U - - - ML 81 80 3 83 3 1 2 99 177 -5.700 -0.057 -5.700 -1.919 -1.548 -2.090 1.659 D 82 80 3 83 3 0 0 96 173 -11.551 -1.585 -0.585 IL 83 83 3 83 3 1 3 106 185 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 28 - a - - - ML 84 83 3 86 3 1 1 98 176 -5.700 -0.057 -5.700 0.800 -1.368 0.460 -1.012 D 85 83 3 86 3 0 0 94 172 -11.551 -1.585 -0.585 IL 86 86 3 86 3 1 2 105 184 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 29 - u - - - ML 87 86 3 89 3 1 1 96 174 -5.700 -0.057 -5.700 0.230 -0.960 -1.023 0.865 D 88 86 3 89 3 0 0 93 170 -11.551 -1.585 -0.585 IL 89 89 3 89 3 1 2 103 182 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 30 - G - - - ML 90 89 3 92 3 1 1 95 172 -5.700 -0.057 -5.700 -1.931 -2.762 1.770 -2.482 D 91 89 3 92 3 0 0 91 168 -11.551 -1.585 -0.585 IL 92 92 3 92 3 1 2 102 180 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 31 - U - - - ML 93 92 3 95 3 1 1 93 171 -5.700 -0.057 -5.700 -1.919 -1.548 -2.090 1.659 D 94 92 3 95 3 0 0 90 167 -11.551 -1.585 -0.585 IL 95 95 3 95 3 1 2 101 179 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 32 - u - - - ML 96 95 3 98 3 1 1 92 169 -5.700 -0.057 -5.700 0.230 -0.960 -1.023 0.865 D 97 95 3 98 3 0 0 88 165 -11.551 -1.585 -0.585 IL 98 98 3 98 3 1 1 99 177 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 33 ] 33 - c - - - ML 99 98 3 101 3 1 1 90 167 -5.700 -0.057 -5.700 -1.325 0.949 -1.511 0.400 D 100 98 3 101 3 0 0 87 163 -11.551 -1.585 -0.585 IL 101 101 3 101 3 1 1 98 176 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 34 - u - - - ML 102 101 3 104 3 1 1 89 165 -5.700 -0.057 -5.700 0.113 -0.836 0.221 0.255 D 103 101 3 104 3 0 0 85 162 -11.551 -1.585 -0.585 IL 104 104 3 104 3 1 1 96 174 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 35 - U - - - ML 105 104 3 107 3 1 1 87 164 -5.700 -0.057 -5.700 -1.919 -1.548 -2.090 1.659 D 106 104 3 107 3 0 0 84 160 -11.551 -1.585 -0.585 IL 107 107 3 107 3 1 1 95 172 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 36 ] 36 - u - - - ML 108 107 3 110 3 1 1 86 162 -5.700 -0.395 -2.181 0.202 -0.963 -1.029 0.885 D 109 107 3 110 3 0 0 82 158 -11.551 -1.585 -0.585 IL 110 110 3 110 3 1 1 94 171 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 37 ] 37 - U - - - ML 111 110 3 113 3 1 1 85 161 -5.376 -0.071 -5.376 -1.312 -1.045 -1.450 1.458 D 112 110 3 113 3 0 0 80 155 -13.717 -3.751 -0.111 IL 113 113 3 113 3 1 1 92 169 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 38 - G - - - ML 114 113 3 116 3 1 1 83 159 -5.376 -0.071 -5.376 -1.421 -2.045 1.627 -1.756 D 115 113 3 116 3 0 0 80 155 -13.717 -3.751 -0.111 IL 116 116 3 116 3 1 1 91 167 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 39 - A - - - ML 117 116 3 119 3 1 1 81 157 -5.376 -0.071 -5.376 1.572 -1.727 -1.459 -1.468 D 118 116 3 119 3 0 0 79 154 -13.717 -0.232 -2.751 IL 119 119 3 119 3 1 1 89 165 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 40 - a - - - ML 120 119 3 122 3 1 1 80 155 -5.700 -0.057 -5.700 0.826 -1.366 0.425 -1.011 D 121 119 3 122 3 0 0 76 151 -11.551 -1.585 -0.585 IL 122 122 3 122 3 1 1 88 164 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 41 ] 41 - C - - - ML 123 122 3 125 3 1 1 78 153 -5.700 -0.057 -5.700 -2.184 1.697 -2.397 -1.523 D 124 122 3 125 3 0 0 74 149 -11.551 -1.585 -0.585 IL 125 125 3 125 3 1 1 86 162 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 42 - u - - - ML 126 125 3 128 3 1 1 76 151 -5.700 -0.057 -5.700 0.175 0.077 -0.831 0.326 D 127 125 3 128 3 0 0 73 147 -11.551 -1.585 -0.585 IL 128 128 3 128 3 1 1 85 160 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 43 - u - - - ML 129 128 3 131 3 1 1 75 149 -5.700 -0.057 -5.700 -1.233 0.319 -1.412 0.964 D 130 128 3 131 3 0 0 71 145 -11.551 -1.585 -0.585 IL 131 131 3 131 3 1 1 83 158 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 44 - a - - - ML 132 131 3 134 3 1 1 73 147 -5.700 -0.057 -5.700 0.826 -1.366 0.425 -1.011 D 133 131 3 134 3 0 0 69 143 -11.551 -1.585 -0.585 IL 134 134 3 134 3 1 1 82 156 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 45 - G - - - ML 135 134 3 137 3 1 1 71 145 -5.700 -0.057 -5.700 -1.931 -2.762 1.770 -2.482 D 136 134 3 137 3 0 0 67 141 -11.551 -1.585 -0.585 IL 137 137 3 137 3 1 1 80 154 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 46 - G - - - ML 138 137 3 140 3 1 1 70 143 -5.700 -0.057 -5.700 -1.931 -2.762 1.770 -2.482 D 139 137 3 140 3 0 0 66 138 -11.551 -1.585 -0.585 IL 140 140 3 140 3 1 1 78 153 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 47 ] 47 - G - - - ML 141 140 3 143 3 1 1 68 141 -5.700 -0.057 -5.700 -1.931 -2.762 1.770 -2.482 D 142 140 3 143 3 0 0 64 136 -11.551 -1.585 -0.585 IL 143 143 3 143 3 1 1 77 151 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 48 - G - - - ML 144 143 3 146 3 1 1 66 139 -5.700 -0.057 -5.700 -1.931 -2.762 1.770 -2.482 D 145 143 3 146 3 0 0 62 134 -11.551 -1.585 -0.585 IL 146 146 3 146 3 1 1 75 148 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 49 - U - - - ML 147 146 3 149 3 1 1 64 136 -5.700 -0.057 -5.700 -1.919 -1.548 -2.090 1.659 D 148 146 3 149 3 0 0 60 131 -11.551 -1.585 -0.585 IL 149 149 3 149 3 1 1 73 146 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 50 ] 50 - A - - - ML 150 149 3 152 3 1 1 62 134 -5.700 -0.057 -5.700 1.769 -2.512 -2.247 -2.276 D 151 149 3 152 3 0 0 57 129 -11.551 -1.585 -0.585 IL 152 152 3 152 3 1 1 72 144 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 51 ] 51 - U - - - ML 153 152 3 155 3 1 1 60 131 -5.700 -0.057 -5.700 -1.919 -1.548 -2.090 1.659 D 154 152 3 155 3 0 0 55 126 -11.551 -1.585 -0.585 IL 155 155 3 155 3 1 1 70 142 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 52 ] 52 - C - - - ML 156 155 3 158 3 1 1 58 129 -5.700 -0.057 -5.700 -2.184 1.697 -2.397 -1.523 D 157 155 3 158 3 0 0 52 123 -11.551 -1.585 -0.585 IL 158 158 3 158 3 1 1 68 140 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 53 ] 53 - u - - - ML 159 158 3 161 3 1 1 55 126 -5.700 -0.057 -5.700 -1.233 0.319 -1.412 0.964 D 160 158 3 161 3 0 0 49 119 -11.551 -1.585 -0.585 IL 161 161 3 161 3 1 1 66 137 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 54 ] 54 - U - - - ML 162 161 3 164 3 1 1 52 122 -5.700 -0.057 -5.700 -1.919 -1.548 -2.090 1.659 D 163 161 3 164 3 0 0 44 114 -11.551 -1.585 -0.585 IL 164 164 3 164 3 1 1 64 134 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 55 ] 55 - U - - - ML 165 164 3 167 3 1 1 48 117 -5.700 -0.057 -5.700 -1.919 -1.548 -2.090 1.659 D 166 164 3 167 3 0 0 32 101 -11.551 -1.585 -0.585 IL 167 167 3 167 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 56 ] 56 - U - - - ML 168 167 3 170 2 1 1 1 1 * 0.000 -1.919 -1.548 -2.090 1.659 D 169 167 3 170 2 0 0 0 0 * 0.000 IL 170 170 3 170 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 57 ] - - - - - - E 171 170 3 -1 0 0 0 0 0 // HMMER3/f [3.1b3 | July 2016] NAME CLUST_20 LENG 56 MAXL 134 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Wed Feb 7 22:46:36 2018 COM [1] cmbuild --noss -F selected_tracr_clust/CLUST_20.cm selected_tracr_clust/CLUST_20.aln COM [2] cmbuild --noss -F selected_tracr_clust/CLUST_20.cm selected_tracr_clust/CLUST_20.aln NSEQ 3 EFFN 3.000000 STATS LOCAL MSV -8.4883 0.72404 STATS LOCAL VITERBI -8.7516 0.72404 STATS LOCAL FORWARD -3.3519 0.72404 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.39146 1.53364 1.39344 1.24716 1.38629 1.38629 1.38629 1.38629 0.02311 5.08141 4.09624 0.39730 1.11515 0.00000 * 1 0.16029 3.12721 2.94402 2.96400 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 2 0.16029 3.12721 2.94402 2.96400 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 3 2.72479 3.30093 0.15917 3.10680 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 4 2.72479 3.30093 0.15917 3.10680 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 5 2.89989 0.21012 3.04772 2.44162 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 6 0.81353 2.33337 1.09153 2.08714 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 7 2.71655 2.45957 2.83486 0.23610 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 8 1.24633 2.05362 2.09987 0.77284 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 9 0.16029 3.12721 2.94402 2.96400 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 10 0.16029 3.12721 2.94402 2.96400 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 11 2.72479 3.30093 0.15917 3.10680 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 12 2.89989 0.21012 3.04772 2.44162 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 13 2.89989 0.21012 3.04772 2.44162 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 14 2.72479 3.30093 0.15917 3.10680 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 15 2.71655 2.45957 2.83486 0.23610 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 16 0.16029 3.12721 2.94402 2.96400 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 17 0.16029 3.12721 2.94402 2.96400 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 18 0.83187 2.33427 1.06736 2.08772 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 19 2.72479 3.30093 0.15917 3.10680 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 20 2.71655 2.45957 2.83486 0.23610 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 21 0.16029 3.12721 2.94402 2.96400 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 22 2.71655 2.45957 2.83486 0.23610 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 23 2.89989 0.21012 3.04772 2.44162 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 24 2.89989 0.21012 3.04772 2.44162 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 25 2.89989 0.21012 3.04772 2.44162 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 26 2.89989 0.21012 3.04772 2.44162 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 27 2.71655 2.45957 2.83486 0.23610 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 28 0.83187 2.33427 1.06736 2.08772 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 29 1.22701 2.05158 2.09522 0.78689 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 30 2.72479 3.30093 0.15917 3.10680 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 31 2.71655 2.45957 2.83486 0.23610 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 32 1.22701 2.05158 2.09522 0.78689 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 33 2.30439 0.72848 2.43336 1.10927 - c - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 34 1.30827 1.96553 1.23308 1.20987 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 35 2.71655 2.45957 2.83486 0.23610 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 36 1.24633 2.05362 2.09987 0.77284 - u - - : 1.38629 1.38629 1.38629 1.38629 0.27408 3.95124 1.51188 1.46634 0.26236 1.09861 0.40547 37 2.29575 2.11048 2.39159 0.37593 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04935 3.72652 3.72652 1.46634 0.26236 2.60015 0.07716 38 2.37149 2.80388 0.25868 2.60354 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04935 3.72652 3.72652 1.46634 0.26236 2.60015 0.07716 39 0.29682 2.58364 2.39738 2.40392 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04935 3.72652 3.72652 1.46634 0.26236 0.16079 1.90700 40 0.81353 2.33337 1.09153 2.08714 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 41 2.89989 0.21012 3.04772 2.44162 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 42 1.26477 1.33303 1.96198 1.16015 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 43 2.24075 1.16491 2.36511 0.71799 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 44 0.81353 2.33337 1.09153 2.08714 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 45 2.72479 3.30093 0.15917 3.10680 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 46 2.72479 3.30093 0.15917 3.10680 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 47 2.72479 3.30093 0.15917 3.10680 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 48 2.72479 3.30093 0.15917 3.10680 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 49 2.71655 2.45957 2.83486 0.23610 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 50 0.16029 3.12721 2.94402 2.96400 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 51 2.71655 2.45957 2.83486 0.23610 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 52 2.89989 0.21012 3.04772 2.44162 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 53 2.24075 1.16491 2.36511 0.71799 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 54 2.71655 2.45957 2.83486 0.23610 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 55 2.71655 2.45957 2.83486 0.23610 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03922 3.95124 3.95124 1.46634 0.26236 1.09861 0.40547 56 2.71655 2.45957 2.83486 0.23610 - U - - : 1.38629 1.38629 1.38629 1.38629 * 0.00000 * 0.45905 0.99935 0.00000 * // ==> CLUST_22.cm <== INFERNAL1/a [1.1.2 | July 2016] NAME CLUST_22 STATES 205 NODES 69 CLEN 67 W 150 ALPH RNA RF no CONS yes MAP yes DATE Wed Feb 7 22:46:36 2018 COM [1] cmbuild --noss -F selected_tracr_clust/CLUST_22.cm selected_tracr_clust/CLUST_22.aln PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 3 EFFN 2.633789 CKSUM 3141517125 NULL 0.000 0.000 0.000 0.000 EFP7GF -8.1481 0.71877 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 150 235 -7.211 -7.418 -0.044 -5.832 IL 1 1 2 1 4 1 24 152 237 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 24 152 237 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 1 23 151 235 -5.595 -0.061 -5.595 1.716 -2.245 -1.985 -2.000 D 4 2 3 5 3 0 19 147 232 -11.551 -1.585 -0.585 IL 5 5 3 5 3 1 25 157 242 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - A - - - ML 6 5 3 8 3 1 23 149 234 -5.595 -0.061 -5.595 1.716 -2.245 -1.985 -2.000 D 7 5 3 8 3 0 18 146 230 -11.551 -1.585 -0.585 IL 8 8 3 8 3 1 24 155 241 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - A - - - ML 9 8 3 11 3 1 22 148 232 -5.595 -0.061 -5.595 1.716 -2.245 -1.985 -2.000 D 10 8 3 11 3 0 17 145 229 -11.551 -1.585 -0.585 IL 11 11 3 11 3 1 24 154 239 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - A - - - ML 12 11 3 14 3 1 21 147 231 -5.595 -0.061 -5.595 1.716 -2.245 -1.985 -2.000 D 13 11 3 14 3 0 17 143 227 -11.551 -1.585 -0.585 IL 14 14 3 14 3 1 23 153 238 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - G - - - ML 15 14 3 17 3 1 20 145 229 -5.595 -0.061 -5.595 0.115 -1.479 1.070 -1.125 D 16 14 3 17 3 0 16 142 226 -11.551 -1.585 -0.585 IL 17 17 3 17 3 1 22 152 236 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - U - - - ML 18 17 3 20 3 1 20 144 228 -5.595 -0.061 -5.595 -1.711 -1.377 -1.873 1.602 D 19 17 3 20 3 0 15 141 224 -11.551 -1.585 -0.585 IL 20 20 3 20 3 1 21 150 235 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - U - - - ML 21 20 3 23 3 1 19 143 226 -5.595 -0.061 -5.595 -1.711 -1.377 -1.873 1.602 D 22 20 3 23 3 0 14 139 223 -11.551 -1.585 -0.585 IL 23 23 3 23 3 1 21 149 234 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - U - - - ML 24 23 3 26 3 1 18 141 225 -5.595 -0.061 -5.595 -1.711 -1.377 -1.873 1.602 D 25 23 3 26 3 0 14 138 221 -11.551 -1.585 -0.585 IL 26 26 3 26 3 1 20 148 232 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - A - - - ML 27 26 3 29 3 1 18 140 223 -5.595 -0.061 -5.595 1.716 -2.245 -1.985 -2.000 D 28 26 3 29 3 0 13 137 220 -11.551 -1.585 -0.585 IL 29 29 3 29 3 1 19 146 231 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - c - - - ML 30 29 3 32 3 1 17 139 222 -5.595 -0.061 -5.595 -1.190 0.889 -1.369 0.404 D 31 29 3 32 3 0 12 135 218 -11.551 -1.585 -0.585 IL 32 32 3 32 3 1 19 145 229 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - U - - - ML 33 32 3 35 3 1 16 137 220 -5.595 -0.061 -5.595 -1.711 -1.377 -1.873 1.602 D 34 32 3 35 3 0 12 134 217 -11.551 -1.585 -0.585 IL 35 35 3 35 3 1 18 144 228 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - C - - - ML 36 35 3 38 3 1 16 136 219 -5.595 -0.061 -5.595 -1.964 1.644 -2.165 -1.337 D 37 35 3 38 3 0 11 133 215 -11.551 -1.585 -0.585 IL 38 38 3 38 3 1 17 142 226 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - A - - - ML 39 38 3 41 3 1 15 135 217 -5.595 -0.061 -5.595 1.716 -2.245 -1.985 -2.000 D 40 38 3 41 3 0 10 131 214 -11.551 -1.585 -0.585 IL 41 41 3 41 3 1 16 141 225 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - a - - - ML 42 41 3 44 3 1 14 133 216 -5.595 -0.061 -5.595 0.750 0.219 -0.984 -0.623 D 43 41 3 44 3 0 10 130 212 -11.551 -1.585 -0.585 IL 44 44 3 44 3 1 16 140 223 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - A - - - ML 45 44 3 47 3 1 13 132 214 -5.595 -0.061 -5.595 1.716 -2.245 -1.985 -2.000 D 46 44 3 47 3 0 9 129 211 -11.551 -1.585 -0.585 IL 47 47 3 47 3 1 15 138 222 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - U - - - ML 48 47 3 50 3 1 13 131 213 -5.595 -0.061 -5.595 -1.711 -1.377 -1.873 1.602 D 49 47 3 50 3 0 8 127 209 -11.551 -1.585 -0.585 IL 50 50 3 50 3 1 14 137 220 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - C - - - ML 51 50 3 53 3 1 12 129 211 -5.595 -0.061 -5.595 -1.964 1.644 -2.165 -1.337 D 52 50 3 53 3 0 8 126 208 -11.551 -1.585 -0.585 IL 53 53 3 53 3 1 14 136 219 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - G - - - ML 54 53 3 56 3 1 11 128 210 -5.595 -0.061 -5.595 -1.767 -2.530 1.732 -2.247 D 55 53 3 56 3 0 7 125 206 -11.551 -1.585 -0.585 IL 56 56 3 56 3 1 13 134 217 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - C - - - ML 57 56 3 59 3 1 11 127 208 -5.595 -0.061 -5.595 -1.964 1.644 -2.165 -1.337 D 58 56 3 59 3 0 6 123 205 -11.551 -1.585 -0.585 IL 59 59 3 59 3 1 12 133 216 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 20 - c - - - ML 60 59 3 62 3 1 10 125 207 -5.595 -0.061 -5.595 -1.190 0.889 -1.369 0.404 D 61 59 3 62 3 0 6 122 203 -11.551 -1.585 -0.585 IL 62 62 3 62 3 1 11 132 214 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 21 - c - - - ML 63 62 3 65 3 1 9 124 205 -5.595 -0.061 -5.595 -0.928 0.739 0.242 -0.682 D 64 62 3 65 3 0 5 121 202 -11.551 -1.585 -0.585 IL 65 65 3 65 3 1 11 130 213 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 22 ] 22 - g - - - ML 66 65 3 68 3 1 8 122 204 -5.595 -0.061 -5.595 -0.844 -1.073 0.859 0.206 D 67 65 3 68 3 0 5 119 200 -11.551 -1.585 -0.585 IL 68 68 3 68 3 1 10 129 211 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 23 - a - - - ML 69 68 3 71 3 1 8 121 202 -5.595 -0.061 -5.595 0.738 -1.260 0.465 -0.905 D 70 68 3 71 3 0 4 118 199 -11.551 -1.585 -0.585 IL 71 71 3 71 3 1 9 128 210 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 24 - A - - - ML 72 71 3 74 3 1 7 120 201 -5.595 -0.061 -5.595 1.716 -2.245 -1.985 -2.000 D 73 71 3 74 3 0 4 117 197 -11.551 -1.585 -0.585 IL 74 74 3 74 3 1 8 126 208 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 25 - A - - - ML 75 74 3 77 3 1 6 118 199 -5.595 -0.061 -5.595 1.716 -2.245 -1.985 -2.000 D 76 74 3 77 3 0 3 115 196 -11.551 -1.585 -0.585 IL 77 77 3 77 3 1 7 125 207 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 26 - G - - - ML 78 77 3 80 3 1 5 117 198 -5.595 -0.386 -2.223 -1.767 -2.530 1.732 -2.247 D 79 77 3 80 3 0 3 114 195 -11.551 -1.585 -0.585 IL 80 80 3 80 3 1 8 124 206 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 27 - A - - - ML 81 80 3 83 3 1 5 116 197 -5.285 -0.076 -5.285 1.495 -1.531 -1.253 -1.267 D 82 80 3 83 3 0 2 113 193 -13.593 -3.627 -0.122 IL 83 83 3 83 3 1 7 123 204 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 28 - G - - - ML 84 83 3 86 3 1 5 115 195 -5.285 -0.076 -5.285 -1.278 -1.846 1.570 -1.555 D 85 83 3 86 3 0 2 113 193 -13.593 -0.255 -2.627 IL 86 86 3 86 3 1 6 121 202 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 29 - C - - - ML 87 86 3 89 3 1 4 113 193 -5.595 -0.061 -5.595 -1.964 1.644 -2.165 -1.337 D 88 86 3 89 3 0 0 110 190 -11.551 -1.585 -0.585 IL 89 89 3 89 3 1 6 120 201 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 30 - c - - - ML 90 89 3 92 3 1 4 112 192 -5.595 -0.061 -5.595 -1.190 0.889 -1.369 0.404 D 91 89 3 92 3 0 0 108 188 -11.551 -1.585 -0.585 IL 92 92 3 92 3 1 5 118 199 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 31 - C - - - ML 93 92 3 95 3 1 3 110 190 -5.595 -0.061 -5.595 -1.964 1.644 -2.165 -1.337 D 94 92 3 95 3 0 0 107 186 -11.551 -1.585 -0.585 IL 95 95 3 95 3 1 5 117 198 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 32 - a - - - ML 96 95 3 98 3 1 3 109 188 -5.595 -0.061 -5.595 0.738 -1.260 0.465 -0.905 D 97 95 3 98 3 0 0 105 185 -11.551 -1.585 -0.585 IL 98 98 3 98 3 1 4 116 196 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 33 ] 33 - C - - - ML 99 98 3 101 3 1 2 107 187 -5.595 -0.061 -5.595 -1.964 1.644 -2.165 -1.337 D 100 98 3 101 3 0 0 104 183 -11.551 -1.585 -0.585 IL 101 101 3 101 3 1 4 114 195 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 34 - A - - - ML 102 101 3 104 3 1 2 106 185 -5.595 -0.061 -5.595 1.716 -2.245 -1.985 -2.000 D 103 101 3 104 3 0 0 103 181 -11.551 -1.585 -0.585 IL 104 104 3 104 3 1 3 113 193 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 35 - U - - - ML 105 104 3 107 3 1 2 105 183 -5.595 -0.061 -5.595 -1.711 -1.377 -1.873 1.602 D 106 104 3 107 3 0 0 101 180 -11.551 -1.585 -0.585 IL 107 107 3 107 3 1 3 112 191 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 36 ] 36 - U - - - ML 108 107 3 110 3 1 1 103 182 -5.595 -0.061 -5.595 -1.711 -1.377 -1.873 1.602 D 109 107 3 110 3 0 0 100 178 -11.551 -1.585 -0.585 IL 110 110 3 110 3 1 3 110 190 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 37 ] 37 - G - - - ML 111 110 3 113 3 1 1 102 180 -5.595 -0.061 -5.595 -1.767 -2.530 1.732 -2.247 D 112 110 3 113 3 0 0 98 176 -11.551 -1.585 -0.585 IL 113 113 3 113 3 1 2 109 188 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 38 - G - - - ML 114 113 3 116 3 1 1 100 179 -5.595 -0.061 -5.595 -1.767 -2.530 1.732 -2.247 D 115 113 3 116 3 0 0 97 175 -11.551 -1.585 -0.585 IL 116 116 3 116 3 1 2 107 187 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 39 - u - - - ML 117 116 3 119 3 1 1 99 177 -5.595 -0.061 -5.595 -1.112 0.314 -1.285 0.913 D 118 116 3 119 3 0 0 95 173 -11.551 -1.585 -0.585 IL 119 119 3 119 3 1 2 106 185 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 40 - G - - - ML 120 119 3 122 3 1 1 97 175 -5.595 -0.061 -5.595 -1.767 -2.530 1.732 -2.247 D 121 119 3 122 3 0 0 94 171 -11.551 -1.585 -0.585 IL 122 122 3 122 3 1 1 104 183 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 41 ] 41 - G - - - ML 123 122 3 125 3 1 1 96 174 -5.595 -0.061 -5.595 -1.767 -2.530 1.732 -2.247 D 124 122 3 125 3 0 0 92 170 -11.551 -1.585 -0.585 IL 125 125 3 125 3 1 1 103 182 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 42 - A - - - ML 126 125 3 128 3 1 1 94 172 -5.595 -0.061 -5.595 1.716 -2.245 -1.985 -2.000 D 127 125 3 128 3 0 0 91 168 -11.551 -1.585 -0.585 IL 128 128 3 128 3 1 1 102 180 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 43 - C - - - ML 129 128 3 131 3 1 1 93 170 -5.595 -0.061 -5.595 -1.964 1.644 -2.165 -1.337 D 130 128 3 131 3 0 0 89 166 -11.551 -1.585 -0.585 IL 131 131 3 131 3 1 1 100 178 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 44 - U - - - ML 132 131 3 134 3 1 1 91 168 -5.595 -0.061 -5.595 -1.711 -1.377 -1.873 1.602 D 133 131 3 134 3 0 0 88 164 -11.551 -1.585 -0.585 IL 134 134 3 134 3 1 1 99 177 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 45 - A - - - ML 135 134 3 137 3 1 1 90 167 -5.595 -0.061 -5.595 1.716 -2.245 -1.985 -2.000 D 136 134 3 137 3 0 0 86 163 -11.551 -1.585 -0.585 IL 137 137 3 137 3 1 1 97 175 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 46 - A - - - ML 138 137 3 140 3 1 1 88 165 -5.595 -0.061 -5.595 1.716 -2.245 -1.985 -2.000 D 139 137 3 140 3 0 0 85 161 -11.551 -1.585 -0.585 IL 140 140 3 140 3 1 1 96 173 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 47 ] 47 - A - - - ML 141 140 3 143 3 1 1 87 163 -5.595 -0.061 -5.595 1.716 -2.245 -1.985 -2.000 D 142 140 3 143 3 0 0 83 159 -11.551 -1.585 -0.585 IL 143 143 3 143 3 1 1 94 172 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 48 - C - - - ML 144 143 3 146 3 1 1 85 161 -5.595 -0.061 -5.595 -1.964 1.644 -2.165 -1.337 D 145 143 3 146 3 0 0 82 157 -11.551 -1.585 -0.585 IL 146 146 3 146 3 1 1 93 170 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 49 - A - - - ML 147 146 3 149 3 1 1 84 159 -5.595 -0.061 -5.595 1.716 -2.245 -1.985 -2.000 D 148 146 3 149 3 0 0 80 155 -11.551 -1.585 -0.585 IL 149 149 3 149 3 1 1 91 168 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 50 ] 50 - A - - - ML 150 149 3 152 3 1 1 82 158 -5.595 -0.061 -5.595 1.716 -2.245 -1.985 -2.000 D 151 149 3 152 3 0 0 78 153 -11.551 -1.585 -0.585 IL 152 152 3 152 3 1 1 90 166 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 51 ] 51 - A - - - ML 153 152 3 155 3 1 1 80 156 -5.595 -0.061 -5.595 1.716 -2.245 -1.985 -2.000 D 154 152 3 155 3 0 0 77 151 -11.551 -1.585 -0.585 IL 155 155 3 155 3 1 1 88 164 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 52 ] 52 - U - - - ML 156 155 3 158 3 1 1 79 154 -5.595 -0.061 -5.595 -1.711 -1.377 -1.873 1.602 D 157 155 3 158 3 0 0 75 150 -11.551 -1.585 -0.585 IL 158 158 3 158 3 1 1 87 163 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 53 ] 53 - C - - - ML 159 158 3 161 3 1 1 77 152 -5.595 -0.061 -5.595 -1.964 1.644 -2.165 -1.337 D 160 158 3 161 3 0 0 73 148 -11.551 -1.585 -0.585 IL 161 161 3 161 3 1 1 85 161 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 54 ] 54 - U - - - ML 162 161 3 164 3 1 1 75 150 -5.595 -0.061 -5.595 -1.711 -1.377 -1.873 1.602 D 163 161 3 164 3 0 0 72 145 -11.551 -1.585 -0.585 IL 164 164 3 164 3 1 1 84 159 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 55 ] 55 - U - - - ML 165 164 3 167 3 1 1 74 148 -5.595 -0.061 -5.595 -1.711 -1.377 -1.873 1.602 D 166 164 3 167 3 0 0 70 143 -11.551 -1.585 -0.585 IL 167 167 3 167 3 1 1 82 157 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 56 ] 56 - C - - - ML 168 167 3 170 3 1 1 72 146 -5.595 -0.061 -5.595 -1.964 1.644 -2.165 -1.337 D 169 167 3 170 3 0 0 68 141 -11.551 -1.585 -0.585 IL 170 170 3 170 3 1 1 80 155 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 57 ] 57 - G - - - ML 171 170 3 173 3 1 1 70 144 -5.595 -0.061 -5.595 -1.767 -2.530 1.732 -2.247 D 172 170 3 173 3 0 0 66 139 -11.551 -1.585 -0.585 IL 173 173 3 173 3 1 1 79 153 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 58 ] 58 - G - - - ML 174 173 3 176 3 1 1 68 141 -5.595 -0.061 -5.595 -1.767 -2.530 1.732 -2.247 D 175 173 3 176 3 0 0 64 137 -11.551 -1.585 -0.585 IL 176 176 3 176 3 1 1 77 151 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 59 ] 59 - A - - - ML 177 176 3 179 3 1 1 66 139 -5.595 -0.061 -5.595 1.716 -2.245 -1.985 -2.000 D 178 176 3 179 3 0 0 62 134 -11.551 -1.585 -0.585 IL 179 179 3 179 3 1 1 75 149 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 60 ] 60 - U - - - ML 180 179 3 182 3 1 1 65 137 -5.595 -0.061 -5.595 -1.711 -1.377 -1.873 1.602 D 181 179 3 182 3 0 0 60 132 -11.551 -1.585 -0.585 IL 182 182 3 182 3 1 1 74 147 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 61 ] 61 - U - - - ML 183 182 3 185 3 1 1 63 134 -5.595 -0.061 -5.595 -1.711 -1.377 -1.873 1.602 D 184 182 3 185 3 0 0 58 129 -11.551 -1.585 -0.585 IL 185 185 3 185 3 1 1 72 145 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 62 ] 62 - U - - - ML 186 185 3 188 3 1 1 60 132 -5.595 -0.061 -5.595 -1.711 -1.377 -1.873 1.602 D 187 185 3 188 3 0 0 55 126 -11.551 -1.585 -0.585 IL 188 188 3 188 3 1 1 70 142 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 63 ] 63 - G - - - ML 189 188 3 191 3 1 1 58 129 -5.595 -0.061 -5.595 -1.767 -2.530 1.732 -2.247 D 190 188 3 191 3 0 0 53 123 -11.551 -1.585 -0.585 IL 191 191 3 191 3 1 1 68 140 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 64 ] 64 - U - - - ML 192 191 3 194 3 1 1 56 126 -5.595 -0.061 -5.595 -1.711 -1.377 -1.873 1.602 D 193 191 3 194 3 0 0 49 119 -11.551 -1.585 -0.585 IL 194 194 3 194 3 1 1 66 137 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 65 ] 65 - U - - - ML 195 194 3 197 3 1 1 53 122 -5.595 -0.061 -5.595 -1.711 -1.377 -1.873 1.602 D 196 194 3 197 3 0 0 45 114 -11.551 -1.585 -0.585 IL 197 197 3 197 3 1 1 64 134 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 66 ] 66 - U - - - ML 198 197 3 200 3 1 1 48 118 -5.595 -0.061 -5.595 -1.711 -1.377 -1.873 1.602 D 199 197 3 200 3 0 0 32 101 -11.551 -1.585 -0.585 IL 200 200 3 200 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 67 ] 67 - U - - - ML 201 200 3 203 2 1 1 1 1 * 0.000 -1.711 -1.377 -1.873 1.602 D 202 200 3 203 2 0 0 0 0 * 0.000 IL 203 203 3 203 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 68 ] - - - - - - E 204 203 3 -1 0 0 0 0 0 // HMMER3/f [3.1b3 | July 2016] NAME CLUST_22 LENG 67 MAXL 150 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Wed Feb 7 22:46:36 2018 COM [1] cmbuild --noss -F selected_tracr_clust/CLUST_22.cm selected_tracr_clust/CLUST_22.aln COM [2] cmbuild --noss -F selected_tracr_clust/CLUST_22.cm selected_tracr_clust/CLUST_22.aln NSEQ 3 EFFN 2.633789 STATS LOCAL MSV -7.9216 0.71877 STATS LOCAL VITERBI -8.8684 0.71877 STATS LOCAL FORWARD -3.3127 0.71877 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.20186 1.55237 1.56949 1.27486 1.38629 1.38629 1.38629 1.38629 0.02514 4.99829 4.01312 0.39730 1.11515 0.00000 * 1 0.19651 2.94206 2.76202 2.77277 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 2 0.19651 2.94206 2.76202 2.77277 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 3 0.19651 2.94206 2.76202 2.77277 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 4 0.19651 2.94206 2.76202 2.77277 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 5 1.30669 2.41145 0.64447 2.16576 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 6 2.57236 2.34045 2.68452 0.27561 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 7 2.57236 2.34045 2.68452 0.27561 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 8 2.57236 2.34045 2.68452 0.27561 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 9 0.19651 2.94206 2.76202 2.77277 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 10 2.21121 0.77023 2.33519 1.10644 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 11 2.57236 2.34045 2.68452 0.27561 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 12 2.74777 0.24694 2.88682 2.31273 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 13 0.19651 2.94206 2.76202 2.77277 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 14 0.86672 1.23445 2.06841 1.81836 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 15 0.19651 2.94206 2.76202 2.77277 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 16 2.57236 2.34045 2.68452 0.27561 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 17 2.74777 0.24694 2.88682 2.31273 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 18 2.61085 3.14008 0.18562 2.94388 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 19 2.74777 0.24694 2.88682 2.31273 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 20 2.21121 0.77023 2.33519 1.10644 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 21 2.02958 0.87422 1.21867 1.85921 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 22 1.97134 2.12993 0.79086 1.24330 - g - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 23 0.87447 2.25957 1.06430 2.01325 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 24 0.19651 2.94206 2.76202 2.77277 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 25 0.19651 2.94206 2.76202 2.77277 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 26 2.61085 3.14008 0.18562 2.94388 - G - - : 1.38629 1.38629 1.38629 1.38629 0.26774 3.87822 1.54081 1.46634 0.26236 1.09861 0.40547 27 0.34993 2.44767 2.25466 2.26473 - A - - : 1.38629 1.38629 1.38629 1.38629 0.05267 3.66314 3.66314 1.46634 0.26236 2.51401 0.08441 28 2.27181 2.66560 0.29812 2.46389 - G - - : 1.38629 1.38629 1.38629 1.38629 0.05267 3.66314 3.66314 1.46634 0.26236 0.17660 1.82086 29 2.74777 0.24694 2.88682 2.31273 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 30 2.21121 0.77023 2.33519 1.10644 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 31 2.74777 0.24694 2.88682 2.31273 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 32 0.87447 2.25957 1.06430 2.01325 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 33 2.74777 0.24694 2.88682 2.31273 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 34 0.19651 2.94206 2.76202 2.77277 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 35 2.57236 2.34045 2.68452 0.27561 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 36 2.57236 2.34045 2.68452 0.27561 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 37 2.61085 3.14008 0.18562 2.94388 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 38 2.61085 3.14008 0.18562 2.94388 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 39 2.15678 1.16838 2.27687 0.75326 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 40 2.61085 3.14008 0.18562 2.94388 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 41 2.61085 3.14008 0.18562 2.94388 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 42 0.19651 2.94206 2.76202 2.77277 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 43 2.74777 0.24694 2.88682 2.31273 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 44 2.57236 2.34045 2.68452 0.27561 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 45 0.19651 2.94206 2.76202 2.77277 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 46 0.19651 2.94206 2.76202 2.77277 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 47 0.19651 2.94206 2.76202 2.77277 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 48 2.74777 0.24694 2.88682 2.31273 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 49 0.19651 2.94206 2.76202 2.77277 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 50 0.19651 2.94206 2.76202 2.77277 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 51 0.19651 2.94206 2.76202 2.77277 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 52 2.57236 2.34045 2.68452 0.27561 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 53 2.74777 0.24694 2.88682 2.31273 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 54 2.57236 2.34045 2.68452 0.27561 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 55 2.57236 2.34045 2.68452 0.27561 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 56 2.74777 0.24694 2.88682 2.31273 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 57 2.61085 3.14008 0.18562 2.94388 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 58 2.61085 3.14008 0.18562 2.94388 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 59 0.19651 2.94206 2.76202 2.77277 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 60 2.57236 2.34045 2.68452 0.27561 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 61 2.57236 2.34045 2.68452 0.27561 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 62 2.57236 2.34045 2.68452 0.27561 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 63 2.61085 3.14008 0.18562 2.94388 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 64 2.57236 2.34045 2.68452 0.27561 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 65 2.57236 2.34045 2.68452 0.27561 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 66 2.57236 2.34045 2.68452 0.27561 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04226 3.87822 3.87822 1.46634 0.26236 1.09861 0.40547 67 2.57236 2.34045 2.68452 0.27561 - U - - : 1.38629 1.38629 1.38629 1.38629 * 0.00000 * 0.45905 0.99935 0.00000 * // ==> CLUST_24.cm <== INFERNAL1/a [1.1.2 | July 2016] NAME CLUST_24 STATES 169 NODES 57 CLEN 55 W 128 ALPH RNA RF no CONS yes MAP yes DATE Wed Feb 7 22:46:36 2018 COM [1] cmbuild --noss -F selected_tracr_clust/CLUST_24.cm selected_tracr_clust/CLUST_24.aln PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 5 EFFN 5.000000 CKSUM 2519332780 NULL 0.000 0.000 0.000 0.000 EFP7GF -8.1024 0.72356 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 128 208 -7.853 -8.060 -0.028 -6.474 IL 1 1 2 1 4 1 20 130 210 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 20 129 209 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - C - - - ML 3 2 3 5 3 1 19 128 208 -6.170 -0.041 -6.170 -3.122 1.844 -3.376 -2.335 D 4 2 3 5 3 0 15 125 205 -11.551 -1.585 -0.585 IL 5 5 3 5 3 1 21 135 216 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - A - - - ML 6 5 3 8 3 1 18 127 207 -6.170 -0.041 -6.170 1.904 -3.738 -3.372 -3.544 D 7 5 3 8 3 0 15 124 203 -11.551 -1.585 -0.585 IL 8 8 3 8 3 1 20 134 214 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - A - - - ML 9 8 3 11 3 1 17 125 205 -6.170 -0.041 -6.170 1.904 -3.738 -3.372 -3.544 D 10 8 3 11 3 0 14 122 202 -11.551 -1.585 -0.585 IL 11 11 3 11 3 1 19 132 213 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - A - - - ML 12 11 3 14 3 1 16 124 204 -6.170 -0.041 -6.170 1.904 -3.738 -3.372 -3.544 D 13 11 3 14 3 0 13 121 201 -11.551 -1.585 -0.585 IL 14 14 3 14 3 1 18 131 212 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - C - - - ML 15 14 3 17 3 1 16 123 202 -6.170 -0.195 -3.151 -3.122 1.844 -3.376 -2.335 D 16 14 3 17 3 0 13 120 200 -11.551 -1.585 -0.585 IL 17 17 3 17 3 1 17 130 210 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - A - - - ML 18 17 3 20 3 1 15 122 201 -6.020 -0.045 -6.020 1.354 -1.922 -0.242 -1.583 D 19 17 3 20 3 0 12 120 199 -13.303 -0.318 -2.337 IL 20 20 3 20 3 1 17 129 209 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - A - - - ML 21 20 3 23 3 1 14 120 200 -6.170 -0.041 -6.170 1.904 -3.738 -3.372 -3.544 D 22 20 3 23 3 0 10 117 196 -11.551 -1.585 -0.585 IL 23 23 3 23 3 1 16 127 208 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - G - - - ML 24 23 3 26 3 1 13 119 198 -6.170 -0.041 -6.170 -0.034 -2.390 1.373 -2.041 D 25 23 3 26 3 0 10 116 195 -11.551 -1.585 -0.585 IL 26 26 3 26 3 1 15 126 206 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - G - - - ML 27 26 3 29 3 1 13 118 197 -6.170 -0.041 -6.170 -0.034 -2.390 1.373 -2.041 D 28 26 3 29 3 0 9 115 193 -11.551 -1.585 -0.585 IL 29 29 3 29 3 1 14 125 205 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - C - - - ML 30 29 3 32 3 1 12 116 195 -6.170 -0.041 -6.170 -2.035 1.179 -2.251 0.359 D 31 29 3 32 3 0 9 113 192 -11.551 -1.585 -0.585 IL 32 32 3 32 3 1 13 123 203 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - C - - - ML 33 32 3 35 3 1 11 115 194 -6.170 -0.041 -6.170 -1.968 1.053 -2.178 0.535 D 34 32 3 35 3 0 8 112 191 -11.551 -1.585 -0.585 IL 35 35 3 35 3 1 12 122 202 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - U - - - ML 36 35 3 38 3 1 10 114 192 -6.170 -0.503 -1.834 -2.901 -2.363 -3.099 1.830 D 37 35 3 38 3 0 8 111 190 -11.551 -1.585 -0.585 IL 38 38 3 38 3 1 12 121 201 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - U - - - ML 39 38 3 41 3 1 10 113 192 -5.723 -0.056 -5.723 -1.964 -1.586 -2.136 1.670 D 40 38 3 41 3 0 8 110 188 -14.438 -4.472 -0.067 IL 41 41 3 41 3 1 12 120 200 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - c - - - ML 42 41 3 44 3 1 9 112 190 -5.723 -0.056 -5.723 0.087 0.974 -1.292 -0.825 D 43 41 3 44 3 0 8 110 188 -14.438 -0.136 -3.472 IL 44 44 3 44 3 1 11 119 198 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - G - - - ML 45 44 3 47 3 1 9 110 188 -6.170 -0.041 -6.170 0.270 -2.221 1.205 -1.867 D 46 44 3 47 3 0 5 107 185 -11.551 -1.585 -0.585 IL 47 47 3 47 3 1 10 117 197 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - u - - - ML 48 47 3 50 3 1 8 109 187 -6.170 -0.041 -6.170 -1.315 -1.446 0.546 0.825 D 49 47 3 50 3 0 4 106 184 -11.551 -1.585 -0.585 IL 50 50 3 50 3 1 9 116 195 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - G - - - ML 51 50 3 53 3 1 7 107 185 -6.170 -0.041 -6.170 0.075 -2.329 1.318 -1.978 D 52 50 3 53 3 0 4 105 182 -11.551 -1.585 -0.585 IL 53 53 3 53 3 1 8 115 194 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - C - - - ML 54 53 3 56 3 1 6 106 184 -6.170 -0.195 -3.151 -2.078 1.242 -2.298 0.256 D 55 53 3 56 3 0 3 104 181 -11.551 -1.585 -0.585 IL 56 56 3 56 3 1 8 114 192 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - C - - - ML 57 56 3 59 3 1 6 105 183 -6.020 -0.045 -6.020 -2.047 1.423 -2.274 -0.201 D 58 56 3 59 3 0 3 103 181 -13.303 -0.318 -2.337 IL 59 59 3 59 3 1 7 112 191 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 20 - A - - - ML 60 59 3 62 3 1 5 104 181 -6.170 -0.041 -6.170 1.066 -1.972 0.408 -1.620 D 61 59 3 62 3 0 1 100 178 -11.551 -1.585 -0.585 IL 62 62 3 62 3 1 7 111 189 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 21 - A - - - ML 63 62 3 65 3 1 5 102 179 -6.170 -0.041 -6.170 1.904 -3.738 -3.372 -3.544 D 64 62 3 65 3 0 0 99 176 -11.551 -1.585 -0.585 IL 65 65 3 65 3 1 6 110 188 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 22 ] 22 - G - - - ML 66 65 3 68 3 1 4 101 178 -6.170 -0.041 -6.170 -2.637 -3.732 1.877 -3.461 D 67 65 3 68 3 0 0 98 175 -11.551 -1.585 -0.585 IL 68 68 3 68 3 1 6 108 187 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 23 - U - - - ML 69 68 3 71 3 1 4 99 176 -6.170 -0.041 -6.170 -2.901 -2.363 -3.099 1.830 D 70 68 3 71 3 0 0 96 173 -11.551 -1.585 -0.585 IL 71 71 3 71 3 1 5 107 185 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 24 - U - - - ML 72 71 3 74 3 1 4 98 175 -6.170 -0.041 -6.170 -2.901 -2.363 -3.099 1.830 D 73 71 3 74 3 0 0 95 171 -11.551 -1.585 -0.585 IL 74 74 3 74 3 1 5 106 184 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 25 - U - - - ML 75 74 3 77 3 1 3 97 173 -6.170 -0.041 -6.170 -2.901 -2.363 -3.099 1.830 D 76 74 3 77 3 0 0 94 170 -11.551 -1.585 -0.585 IL 77 77 3 77 3 1 4 104 182 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 26 - U - - - ML 78 77 3 80 3 1 3 95 172 -6.170 -0.041 -6.170 -2.901 -2.363 -3.099 1.830 D 79 77 3 80 3 0 0 92 168 -11.551 -1.585 -0.585 IL 80 80 3 80 3 1 4 103 181 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 27 - C - - - ML 81 80 3 83 3 1 2 94 170 -6.170 -0.041 -6.170 -2.078 1.242 -2.298 0.256 D 82 80 3 83 3 0 0 91 167 -11.551 -1.585 -0.585 IL 83 83 3 83 3 1 3 102 179 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 28 - u - - - ML 84 83 3 86 3 1 2 93 169 -6.170 -0.041 -6.170 0.606 -1.366 -1.449 0.786 D 85 83 3 86 3 0 0 89 165 -11.551 -1.585 -0.585 IL 86 86 3 86 3 1 3 100 178 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 29 - C - - - ML 87 86 3 89 3 1 2 91 167 -6.170 -0.041 -6.170 -0.619 1.500 -2.329 -1.638 D 88 86 3 89 3 0 0 88 164 -11.551 -1.585 -0.585 IL 89 89 3 89 3 1 3 99 176 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 30 - U - - - ML 90 89 3 92 3 1 2 90 166 -6.170 -0.041 -6.170 -0.316 -1.537 -1.748 1.353 D 91 89 3 92 3 0 0 87 162 -11.551 -1.585 -0.585 IL 92 92 3 92 3 1 2 98 175 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 31 - U - - - ML 93 92 3 95 3 1 1 88 164 -6.170 -0.041 -6.170 -2.901 -2.363 -3.099 1.830 D 94 92 3 95 3 0 0 85 160 -11.551 -1.585 -0.585 IL 95 95 3 95 3 1 2 96 173 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 32 - u - - - ML 96 95 3 98 3 1 1 87 162 -6.170 -0.041 -6.170 -1.022 0.425 -0.301 0.437 D 97 95 3 98 3 0 0 84 159 -11.551 -1.585 -0.585 IL 98 98 3 98 3 1 2 95 171 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 33 ] 33 - U - - - ML 99 98 3 101 3 1 1 86 161 -6.170 -0.041 -6.170 -2.901 -2.363 -3.099 1.830 D 100 98 3 101 3 0 0 82 157 -11.551 -1.585 -0.585 IL 101 101 3 101 3 1 2 94 170 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 34 - G - - - ML 102 101 3 104 3 1 1 84 159 -6.170 -0.041 -6.170 -2.637 -3.732 1.877 -3.461 D 103 101 3 104 3 0 0 81 155 -11.551 -1.585 -0.585 IL 104 104 3 104 3 1 1 92 168 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 35 - A - - - ML 105 104 3 107 3 1 1 83 158 -6.170 -0.041 -6.170 1.322 -1.612 -1.729 -0.200 D 106 104 3 107 3 0 0 79 154 -11.551 -1.585 -0.585 IL 107 107 3 107 3 1 1 91 167 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 36 ] 36 - G - - - ML 108 107 3 110 3 1 1 81 156 -6.170 -0.041 -6.170 -0.490 -2.638 1.548 -2.298 D 109 107 3 110 3 0 0 78 152 -11.551 -1.585 -0.585 IL 110 110 3 110 3 1 1 90 165 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 37 ] 37 - C - - - ML 111 110 3 113 3 1 1 80 154 -6.170 -0.041 -6.170 -3.122 1.844 -3.376 -2.335 D 112 110 3 113 3 0 0 76 150 -11.551 -1.585 -0.585 IL 113 113 3 113 3 1 1 88 164 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 38 - C - - - ML 114 113 3 116 3 1 1 78 152 -6.170 -0.041 -6.170 -1.968 1.053 -2.178 0.535 D 115 113 3 116 3 0 0 75 149 -11.551 -1.585 -0.585 IL 116 116 3 116 3 1 1 87 162 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 39 - u - - - ML 117 116 3 119 3 1 1 77 151 -6.170 -0.041 -6.170 -1.012 0.303 -0.299 0.543 D 118 116 3 119 3 0 0 73 147 -11.551 -1.585 -0.585 IL 119 119 3 119 3 1 1 85 160 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 40 - c - - - ML 120 119 3 122 3 1 1 75 149 -6.170 -0.041 -6.170 0.412 0.978 -1.790 -1.287 D 121 119 3 122 3 0 0 72 145 -11.551 -1.585 -0.585 IL 122 122 3 122 3 1 1 84 159 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 41 ] 41 - U - - - ML 123 122 3 125 3 1 1 74 147 -6.170 -0.041 -6.170 -1.383 -1.456 0.117 1.116 D 124 122 3 125 3 0 0 70 143 -11.551 -1.585 -0.585 IL 125 125 3 125 3 1 1 82 157 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 42 - U - - - ML 126 125 3 128 3 1 1 72 145 -6.170 -0.041 -6.170 -1.867 0.496 -2.069 1.055 D 127 125 3 128 3 0 0 69 141 -11.551 -1.585 -0.585 IL 128 128 3 128 3 1 1 81 155 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 43 - A - - - ML 129 128 3 131 3 1 1 71 144 -6.170 -0.041 -6.170 1.904 -3.738 -3.372 -3.544 D 130 128 3 131 3 0 0 67 140 -11.551 -1.585 -0.585 IL 131 131 3 131 3 1 1 80 154 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 44 - U - - - ML 132 131 3 134 3 1 1 69 142 -6.170 -0.041 -6.170 -2.901 -2.363 -3.099 1.830 D 133 131 3 134 3 0 0 65 138 -11.551 -1.585 -0.585 IL 134 134 3 134 3 1 1 78 152 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 45 - g - - - ML 135 134 3 137 3 1 1 67 140 -6.170 -0.041 -6.170 -0.212 -1.147 0.493 0.354 D 136 134 3 137 3 0 0 64 136 -11.551 -1.585 -0.585 IL 137 137 3 137 3 1 1 77 150 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 46 - u - - - ML 138 137 3 140 3 1 1 66 138 -6.170 -0.579 -1.659 0.111 -1.088 0.201 0.379 D 139 137 3 140 3 0 0 63 135 -11.551 -1.585 -0.585 IL 140 140 3 140 3 1 1 76 149 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 47 ] 47 - g - - - ML 141 140 3 143 3 1 1 64 136 -5.650 -0.059 -5.650 -0.965 -0.011 0.961 -0.866 D 142 140 3 143 3 0 0 62 133 -14.598 -0.121 -3.633 IL 143 143 3 143 3 1 1 74 146 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 48 - G - - - ML 144 143 3 146 3 1 1 62 134 -6.170 -0.041 -6.170 0.270 -2.221 1.205 -1.867 D 145 143 3 146 3 0 0 58 129 -11.551 -1.585 -0.585 IL 146 146 3 146 3 1 1 72 145 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 49 - G - - - ML 147 146 3 149 3 1 1 60 131 -6.170 -0.041 -6.170 -2.637 -3.732 1.877 -3.461 D 148 146 3 149 3 0 0 56 127 -11.551 -1.585 -0.585 IL 149 149 3 149 3 1 1 71 143 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 50 ] 50 - C - - - ML 150 149 3 152 3 1 1 58 129 -6.170 -0.041 -6.170 -2.293 1.464 -2.531 -0.212 D 151 149 3 152 3 0 0 54 124 -11.551 -1.585 -0.585 IL 152 152 3 152 3 1 1 69 141 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 51 ] 51 - C - - - ML 153 152 3 155 3 1 1 56 127 -6.170 -0.041 -6.170 -3.122 1.844 -3.376 -2.335 D 154 152 3 155 3 0 0 51 121 -11.551 -1.585 -0.585 IL 155 155 3 155 3 1 1 67 138 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 52 ] 52 - u - - - ML 156 155 3 158 3 1 1 54 124 -6.170 -0.041 -6.170 0.394 -1.379 -1.478 0.958 D 157 155 3 158 3 0 0 48 117 -11.551 -1.585 -0.585 IL 158 158 3 158 3 1 1 66 136 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 53 ] 53 - U - - - ML 159 158 3 161 3 1 1 51 121 -6.170 -0.041 -6.170 -2.901 -2.363 -3.099 1.830 D 160 158 3 161 3 0 0 43 113 -11.551 -1.585 -0.585 IL 161 161 3 161 3 1 1 64 134 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 54 ] 54 - U - - - ML 162 161 3 164 3 1 1 47 116 -6.170 -0.041 -6.170 -2.901 -2.363 -3.099 1.830 D 163 161 3 164 3 0 0 32 101 -11.551 -1.585 -0.585 IL 164 164 3 164 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 55 ] 55 - u - - - ML 165 164 3 167 2 1 1 1 1 * 0.000 0.394 -1.379 -1.478 0.958 D 166 164 3 167 2 0 0 0 0 * 0.000 IL 167 167 3 167 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 56 ] - - - - - - E 168 167 3 -1 0 0 0 0 0 // HMMER3/f [3.1b3 | July 2016] NAME CLUST_24 LENG 55 MAXL 128 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Wed Feb 7 22:46:36 2018 COM [1] cmbuild --noss -F selected_tracr_clust/CLUST_24.cm selected_tracr_clust/CLUST_24.aln COM [2] cmbuild --noss -F selected_tracr_clust/CLUST_24.cm selected_tracr_clust/CLUST_24.aln NSEQ 5 EFFN 5.000000 STATS LOCAL MSV -7.9150 0.72356 STATS LOCAL VITERBI -8.6684 0.72356 STATS LOCAL FORWARD -3.6320 0.72356 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.42462 1.46225 1.59744 1.12310 1.38629 1.38629 1.38629 1.38629 0.01604 5.44299 4.45781 0.39730 1.11515 0.00000 * 1 3.55029 0.10797 3.72605 3.00490 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 2 0.06648 3.97700 3.72374 3.84293 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 3 0.06648 3.97700 3.72374 3.84293 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 4 0.06648 3.97700 3.72374 3.84293 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 5 3.55029 0.10797 3.72605 3.00490 - C - - : 1.38629 1.38629 1.38629 1.38629 0.13522 4.27667 2.18402 1.46634 0.26236 1.09861 0.40547 6 0.44755 2.71869 1.55393 2.48372 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03130 4.17275 4.17275 1.46634 0.26236 0.22052 1.62002 7 0.06648 3.97700 3.72374 3.84293 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 8 1.40985 3.04303 0.43482 2.80099 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 9 1.40985 3.04303 0.43482 2.80099 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 10 2.79694 0.56941 2.94644 1.13750 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 11 2.75018 0.65641 2.89602 1.01575 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 12 3.39709 3.02431 3.53405 0.11794 - U - - : 1.38629 1.38629 1.38629 1.38629 0.34861 4.27667 1.27138 1.46634 0.26236 1.09861 0.40547 13 2.74771 2.48528 2.86720 0.22845 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03861 3.96666 3.96666 1.46634 0.26236 3.09974 0.04611 14 1.32600 0.71093 2.28155 1.95793 - c - - : 1.38629 1.38629 1.38629 1.38629 0.03861 3.96666 3.96666 1.46634 0.26236 0.09444 2.40659 15 1.19886 2.92563 0.55110 2.68073 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 16 2.29764 2.38883 1.00778 0.81478 - u - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 17 1.33447 3.00069 0.47241 2.75750 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 18 2.82697 0.52540 2.97890 1.20852 - C - - : 1.38629 1.38629 1.38629 1.38629 0.13522 4.27667 2.18402 1.46634 0.26236 1.09861 0.40547 19 2.80535 0.40006 2.96244 1.52535 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03130 4.17275 4.17275 1.46634 0.26236 0.22052 1.62002 20 0.64769 2.75352 1.10346 2.50933 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 21 0.06648 3.97700 3.72374 3.84293 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 22 3.21442 3.97314 0.08523 3.78506 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 23 3.39709 3.02431 3.53405 0.11794 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 24 3.39709 3.02431 3.53405 0.11794 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 25 3.39709 3.02431 3.53405 0.11794 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 26 3.39709 3.02431 3.53405 0.11794 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 27 2.82697 0.52540 2.97890 1.20852 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 28 0.96658 2.33339 2.39084 0.84142 - u - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 29 1.81528 0.34652 3.00046 2.52197 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 30 1.60526 2.45187 2.59783 0.44849 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 31 3.39709 3.02431 3.53405 0.11794 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 32 2.09479 1.09181 1.59511 1.08350 - u - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 33 3.39709 3.02431 3.53405 0.11794 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 34 3.21442 3.97314 0.08523 3.78506 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 35 0.46962 2.50379 2.58492 1.52519 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 36 1.72565 3.21506 0.31339 2.97935 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 37 3.55029 0.10797 3.72605 3.00490 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 38 2.75018 0.65641 2.89602 1.01575 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 39 2.08786 1.17596 1.59372 1.00962 - u - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 40 1.10051 0.70823 2.62672 2.27818 - c - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 41 2.34517 2.39580 1.30539 0.61248 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 42 2.68025 1.04248 2.82063 0.65526 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 43 0.06648 3.97700 3.72374 3.84293 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 44 3.39709 3.02431 3.53405 0.11794 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 45 1.53333 2.18124 1.04455 1.14121 - g - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 46 1.30921 2.14019 1.24718 1.12387 - u - - : 1.38629 1.38629 1.38629 1.38629 0.40138 4.27667 1.14975 1.46634 0.26236 1.09861 0.40547 47 2.05541 1.39360 0.72024 1.98672 - g - - : 1.38629 1.38629 1.38629 1.38629 0.04066 3.91595 3.91595 1.46634 0.26236 0.08407 2.51784 48 1.19886 2.92563 0.55110 2.68073 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 49 3.21442 3.97314 0.08523 3.78506 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 50 2.97601 0.37125 3.14090 1.53299 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 51 3.55029 0.10797 3.72605 3.00490 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 52 1.11327 2.34241 2.41052 0.72226 - u - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 53 3.39709 3.02431 3.53405 0.11794 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 54 3.39709 3.02431 3.53405 0.11794 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02817 4.27667 4.27667 1.46634 0.26236 1.09861 0.40547 55 1.11327 2.34241 2.41052 0.72226 - u - - : 1.38629 1.38629 1.38629 1.38629 * 0.00000 * 0.45905 0.99935 0.00000 * // ==> CLUST_26.cm <== INFERNAL1/a [1.1.2 | July 2016] NAME CLUST_26 STATES 256 NODES 86 CLEN 84 W 174 ALPH RNA RF no CONS yes MAP yes DATE Wed Feb 7 22:46:36 2018 COM [1] cmbuild --noss -F selected_tracr_clust/CLUST_26.cm selected_tracr_clust/CLUST_26.aln PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 3 EFFN 2.370117 CKSUM 1415674364 NULL 0.000 0.000 0.000 0.000 EFP7GF -7.0607 0.71851 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 174 263 -7.118 -7.325 -0.047 -5.739 IL 1 1 2 1 4 1 9 176 265 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 9 176 264 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - C - - - ML 3 2 3 5 3 1 9 174 263 -5.514 -0.065 -5.514 -1.797 1.596 -1.987 -1.196 D 4 2 3 5 3 0 4 171 259 -11.551 -1.585 -0.585 IL 5 5 3 5 3 1 10 180 269 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - A - - - ML 6 5 3 8 3 1 8 173 261 -5.514 -0.065 -5.514 1.669 -2.046 -1.786 -1.796 D 7 5 3 8 3 0 3 170 258 -11.551 -1.585 -0.585 IL 8 8 3 8 3 1 10 179 268 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - A - - - ML 9 8 3 11 3 1 7 172 260 -5.514 -0.065 -5.514 1.669 -2.046 -1.786 -1.796 D 10 8 3 11 3 0 2 168 257 -11.551 -1.585 -0.585 IL 11 11 3 11 3 1 9 177 267 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - A - - - ML 12 11 3 14 3 1 7 170 259 -5.514 -0.065 -5.514 1.669 -2.046 -1.786 -1.796 D 13 11 3 14 3 0 2 167 255 -11.551 -1.585 -0.585 IL 14 14 3 14 3 1 8 176 265 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - C - - - ML 15 14 3 17 3 1 6 169 257 -5.514 -0.065 -5.514 -1.797 1.596 -1.987 -1.196 D 16 14 3 17 3 0 1 166 254 -11.551 -1.585 -0.585 IL 17 17 3 17 3 1 8 175 264 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - A - - - ML 18 17 3 20 3 1 5 168 256 -5.514 -0.065 -5.514 1.669 -2.046 -1.786 -1.796 D 19 17 3 20 3 0 0 165 252 -11.551 -1.585 -0.585 IL 20 20 3 20 3 1 7 174 262 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - A - - - ML 21 20 3 23 3 1 5 167 254 -5.514 -0.065 -5.514 1.669 -2.046 -1.786 -1.796 D 22 20 3 23 3 0 0 163 251 -11.551 -1.585 -0.585 IL 23 23 3 23 3 1 6 172 261 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - A - - - ML 24 23 3 26 3 1 4 165 253 -5.514 -0.065 -5.514 1.669 -2.046 -1.786 -1.796 D 25 23 3 26 3 0 0 162 250 -11.551 -1.585 -0.585 IL 26 26 3 26 3 1 6 171 260 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - G - - - ML 27 26 3 29 3 1 4 164 252 -5.514 -0.065 -5.514 -1.639 -2.351 1.698 -2.065 D 28 26 3 29 3 0 0 161 248 -11.551 -1.585 -0.585 IL 29 29 3 29 3 1 5 170 258 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - C - - - ML 30 29 3 32 3 1 3 163 250 -5.514 -0.065 -5.514 -1.797 1.596 -1.987 -1.196 D 31 29 3 32 3 0 0 160 247 -11.551 -1.585 -0.585 IL 32 32 3 32 3 1 5 169 257 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - U - - - ML 33 32 3 35 3 1 3 161 249 -5.514 -0.065 -5.514 -1.558 -1.250 -1.712 1.553 D 34 32 3 35 3 0 0 158 245 -11.551 -1.585 -0.585 IL 35 35 3 35 3 1 4 167 255 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - U - - - ML 36 35 3 38 3 1 2 160 247 -5.514 -0.065 -5.514 -1.558 -1.250 -1.712 1.553 D 37 35 3 38 3 0 0 157 244 -11.551 -1.585 -0.585 IL 38 38 3 38 3 1 4 166 254 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - C - - - ML 39 38 3 41 3 1 2 159 246 -5.514 -0.065 -5.514 -1.797 1.596 -1.987 -1.196 D 40 38 3 41 3 0 0 156 243 -11.551 -1.585 -0.585 IL 41 41 3 41 3 1 3 165 253 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - a - - - ML 42 41 3 44 3 1 2 158 244 -5.514 -0.065 -5.514 0.822 -1.180 0.295 -0.828 D 43 41 3 44 3 0 0 154 241 -11.551 -1.585 -0.585 IL 44 44 3 44 3 1 3 164 251 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - G - - - ML 45 44 3 47 3 1 1 156 243 -5.514 -0.065 -5.514 -1.639 -2.351 1.698 -2.065 D 46 44 3 47 3 0 0 153 240 -11.551 -1.585 -0.585 IL 47 47 3 47 3 1 2 162 250 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - C - - - ML 48 47 3 50 3 1 1 155 242 -5.514 -0.065 -5.514 -1.797 1.596 -1.987 -1.196 D 49 47 3 50 3 0 0 152 238 -11.551 -1.585 -0.585 IL 50 50 3 50 3 1 2 161 248 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - U - - - ML 51 50 3 53 3 1 1 154 240 -5.514 -0.065 -5.514 -1.558 -1.250 -1.712 1.553 D 52 50 3 53 3 0 0 150 237 -11.551 -1.585 -0.585 IL 53 53 3 53 3 1 2 160 247 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - G - - - ML 54 53 3 56 3 1 1 152 239 -5.514 -0.065 -5.514 -1.639 -2.351 1.698 -2.065 D 55 53 3 56 3 0 0 149 235 -11.551 -1.585 -0.585 IL 56 56 3 56 3 1 2 158 246 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - A - - - ML 57 56 3 59 3 1 1 151 237 -5.514 -0.065 -5.514 1.669 -2.046 -1.786 -1.796 D 58 56 3 59 3 0 0 148 234 -11.551 -1.585 -0.585 IL 59 59 3 59 3 1 1 157 244 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 20 - G - - - ML 60 59 3 62 3 1 1 150 236 -5.514 -0.065 -5.514 -1.639 -2.351 1.698 -2.065 D 61 59 3 62 3 0 0 147 232 -11.551 -1.585 -0.585 IL 62 62 3 62 3 1 1 156 243 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 21 - U - - - ML 63 62 3 65 3 1 1 148 234 -5.514 -0.065 -5.514 -1.558 -1.250 -1.712 1.553 D 64 62 3 65 3 0 0 145 231 -11.551 -1.585 -0.585 IL 65 65 3 65 3 1 1 155 241 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 22 ] 22 - U - - - ML 66 65 3 68 3 1 1 147 233 -5.514 -0.065 -5.514 -1.558 -1.250 -1.712 1.553 D 67 65 3 68 3 0 0 144 230 -11.551 -1.585 -0.585 IL 68 68 3 68 3 1 1 153 240 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 23 - U - - - ML 69 68 3 71 3 1 1 146 232 -5.514 -0.065 -5.514 -1.558 -1.250 -1.712 1.553 D 70 68 3 71 3 0 0 143 228 -11.551 -1.585 -0.585 IL 71 71 3 71 3 1 1 152 238 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 24 - c - - - ML 72 71 3 74 3 1 1 145 230 -5.514 -0.065 -5.514 -1.140 0.960 -1.316 0.262 D 73 71 3 74 3 0 0 141 227 -11.551 -1.585 -0.585 IL 74 74 3 74 3 1 1 151 237 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 25 - A - - - ML 75 74 3 77 3 1 1 143 229 -5.514 -0.065 -5.514 1.669 -2.046 -1.786 -1.796 D 76 74 3 77 3 0 0 140 225 -11.551 -1.585 -0.585 IL 77 77 3 77 3 1 1 149 236 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 26 - a - - - ML 78 77 3 80 3 1 1 142 227 -5.514 -0.065 -5.514 0.791 -0.853 -0.842 0.213 D 79 77 3 80 3 0 0 139 224 -11.551 -1.585 -0.585 IL 80 80 3 80 3 1 1 148 234 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 27 - u - - - ML 81 80 3 83 3 1 1 141 226 -5.514 -0.065 -5.514 -1.035 0.161 -1.203 0.971 D 82 80 3 83 3 0 0 137 222 -11.551 -1.585 -0.585 IL 83 83 3 83 3 1 1 147 233 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 28 - U - - - ML 84 83 3 86 3 1 1 139 224 -5.514 -0.065 -5.514 -1.558 -1.250 -1.712 1.553 D 85 83 3 86 3 0 0 136 221 -11.551 -1.585 -0.585 IL 86 86 3 86 3 1 1 145 231 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 29 - U - - - ML 87 86 3 89 3 1 1 138 223 -5.514 -0.065 -5.514 -1.558 -1.250 -1.712 1.553 D 88 86 3 89 3 0 0 135 219 -11.551 -1.585 -0.585 IL 89 89 3 89 3 1 1 144 230 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 30 - c - - - ML 90 89 3 92 3 1 1 137 221 -5.514 -0.065 -5.514 -1.140 0.960 -1.316 0.262 D 91 89 3 92 3 0 0 133 218 -11.551 -1.585 -0.585 IL 92 92 3 92 3 1 1 143 228 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 31 - U - - - ML 93 92 3 95 3 1 1 135 220 -5.514 -0.315 -2.522 -1.558 -1.250 -1.712 1.553 D 94 92 3 95 3 0 0 131 216 -11.551 -1.585 -0.585 IL 95 95 3 95 3 1 1 142 228 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 32 - G - - - ML 96 95 3 98 3 1 1 135 219 -5.276 -0.076 -5.276 -1.264 -1.827 1.564 -1.535 D 97 95 3 98 3 0 0 128 212 -13.282 -3.316 -0.153 IL 98 98 3 98 3 1 1 141 226 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 33 ] 33 - A - - - ML 99 98 3 101 3 1 1 133 217 -5.276 -0.076 -5.276 1.487 -1.513 -1.233 -1.249 D 100 98 3 101 3 0 0 126 210 -13.282 -3.316 -0.153 IL 101 101 3 101 3 1 1 140 224 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 34 - G - - - ML 102 101 3 104 3 1 1 132 216 -5.276 -0.076 -5.276 -1.264 -1.827 1.564 -1.535 D 103 101 3 104 3 0 0 125 209 -13.282 -3.316 -0.153 IL 104 104 3 104 3 1 1 138 223 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 35 - C - - - ML 105 104 3 107 3 1 1 131 214 -5.276 -0.076 -5.276 -1.329 1.417 -1.482 -0.801 D 106 104 3 107 3 0 0 124 207 -13.282 -3.316 -0.153 IL 107 107 3 107 3 1 1 137 221 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 36 ] 36 - C - - - ML 108 107 3 110 3 1 1 129 213 -5.276 -0.076 -5.276 -1.329 1.417 -1.482 -0.801 D 109 107 3 110 3 0 0 122 206 -13.282 -3.316 -0.153 IL 110 110 3 110 3 1 1 135 220 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 37 ] 37 - C - - - ML 111 110 3 113 3 1 1 128 211 -5.276 -0.076 -5.276 -1.329 1.417 -1.482 -0.801 D 112 110 3 113 3 0 0 121 204 -13.282 -3.316 -0.153 IL 113 113 3 113 3 1 1 134 218 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 38 - A - - - ML 114 113 3 116 3 1 1 126 210 -5.276 -0.076 -5.276 1.487 -1.513 -1.233 -1.249 D 115 113 3 116 3 0 0 120 202 -13.282 -3.316 -0.153 IL 116 116 3 116 3 1 1 133 217 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 39 - U - - - ML 117 116 3 119 3 1 1 125 208 -5.276 -0.076 -5.276 -1.147 -0.906 -1.271 1.379 D 118 116 3 119 3 0 0 118 201 -13.282 -3.316 -0.153 IL 119 119 3 119 3 1 1 131 215 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 40 - G - - - ML 120 119 3 122 3 1 1 124 207 -5.276 -0.076 -5.276 -1.264 -1.827 1.564 -1.535 D 121 119 3 122 3 0 0 117 199 -13.282 -3.316 -0.153 IL 122 122 3 122 3 1 1 130 214 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 41 ] 41 - U - - - ML 123 122 3 125 3 1 1 122 205 -5.276 -0.076 -5.276 -1.147 -0.906 -1.271 1.379 D 124 122 3 125 3 0 0 115 198 -13.282 -3.316 -0.153 IL 125 125 3 125 3 1 1 129 212 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 42 - U - - - ML 126 125 3 128 3 1 1 121 203 -5.276 -0.076 -5.276 -1.147 -0.906 -1.271 1.379 D 127 125 3 128 3 0 0 114 196 -13.282 -3.316 -0.153 IL 128 128 3 128 3 1 1 127 211 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 43 - G - - - ML 129 128 3 131 3 1 1 120 202 -5.276 -0.076 -5.276 -1.264 -1.827 1.564 -1.535 D 130 128 3 131 3 0 0 113 194 -13.282 -3.316 -0.153 IL 131 131 3 131 3 1 1 126 209 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 44 - G - - - ML 132 131 3 134 3 1 1 118 200 -5.276 -0.076 -5.276 -1.264 -1.827 1.564 -1.535 D 133 131 3 134 3 0 0 111 193 -13.282 -3.316 -0.153 IL 134 134 3 134 3 1 1 125 208 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 45 - G - - - ML 135 134 3 137 3 1 1 117 199 -5.276 -0.076 -5.276 -1.264 -1.827 1.564 -1.535 D 136 134 3 137 3 0 0 110 191 -13.282 -3.316 -0.153 IL 137 137 3 137 3 1 1 123 206 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 46 - C - - - ML 138 137 3 140 3 1 1 115 197 -5.276 -0.076 -5.276 -1.329 1.417 -1.482 -0.801 D 139 137 3 140 3 0 0 108 190 -13.282 -3.316 -0.153 IL 140 140 3 140 3 1 1 122 204 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 47 ] 47 - C - - - ML 141 140 3 143 3 1 1 114 195 -5.276 -0.076 -5.276 -1.329 1.417 -1.482 -0.801 D 142 140 3 143 3 0 0 107 188 -13.282 -3.316 -0.153 IL 143 143 3 143 3 1 1 120 203 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 48 - A - - - ML 144 143 3 146 3 1 1 113 194 -5.276 -0.076 -5.276 1.487 -1.513 -1.233 -1.249 D 145 143 3 146 3 0 0 105 186 -13.282 -3.316 -0.153 IL 146 146 3 146 3 1 1 119 201 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 49 - U - - - ML 147 146 3 149 3 1 1 111 192 -5.276 -0.076 -5.276 -1.147 -0.906 -1.271 1.379 D 148 146 3 149 3 0 0 104 185 -13.282 -3.316 -0.153 IL 149 149 3 149 3 1 1 118 200 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 50 ] 50 - A - - - ML 150 149 3 152 3 1 1 110 190 -5.276 -0.076 -5.276 1.487 -1.513 -1.233 -1.249 D 151 149 3 152 3 0 0 103 183 -13.282 -3.316 -0.153 IL 152 152 3 152 3 1 1 116 198 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 51 ] 51 - C - - - ML 153 152 3 155 3 1 1 108 189 -5.276 -0.076 -5.276 -1.329 1.417 -1.482 -0.801 D 154 152 3 155 3 0 0 101 181 -13.282 -3.316 -0.153 IL 155 155 3 155 3 1 1 115 196 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 52 ] 52 - A - - - ML 156 155 3 158 3 1 1 107 187 -5.276 -0.076 -5.276 1.487 -1.513 -1.233 -1.249 D 157 155 3 158 3 0 0 100 180 -13.282 -3.316 -0.153 IL 158 158 3 158 3 1 1 113 195 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 53 ] 53 - U - - - ML 159 158 3 161 3 1 1 105 185 -5.276 -0.076 -5.276 -1.147 -0.906 -1.271 1.379 D 160 158 3 161 3 0 0 98 178 -13.282 -3.316 -0.153 IL 161 161 3 161 3 1 1 112 193 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 54 ] 54 - A - - - ML 162 161 3 164 3 1 1 104 184 -5.276 -0.076 -5.276 1.487 -1.513 -1.233 -1.249 D 163 161 3 164 3 0 0 97 176 -13.282 -3.316 -0.153 IL 164 164 3 164 3 1 1 111 191 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 55 ] 55 - U - - - ML 165 164 3 167 3 1 1 102 182 -5.276 -0.076 -5.276 -1.147 -0.906 -1.271 1.379 D 166 164 3 167 3 0 0 95 174 -13.282 -3.316 -0.153 IL 167 167 3 167 3 1 1 109 190 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 56 ] 56 - G - - - ML 168 167 3 170 3 1 1 101 180 -5.276 -0.076 -5.276 -1.264 -1.827 1.564 -1.535 D 169 167 3 170 3 0 0 94 173 -13.282 -3.316 -0.153 IL 170 170 3 170 3 1 1 108 188 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 57 ] 57 - C - - - ML 171 170 3 173 3 1 1 99 179 -5.276 -0.076 -5.276 -1.329 1.417 -1.482 -0.801 D 172 170 3 173 3 0 0 92 171 -13.282 -3.316 -0.153 IL 173 173 3 173 3 1 1 106 186 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 58 ] 58 - C - - - ML 174 173 3 176 3 1 1 98 177 -5.276 -0.076 -5.276 -1.329 1.417 -1.482 -0.801 D 175 173 3 176 3 0 0 91 169 -13.282 -3.316 -0.153 IL 176 176 3 176 3 1 1 105 185 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 59 ] 59 - A - - - ML 177 176 3 179 3 1 1 96 175 -5.276 -0.076 -5.276 1.487 -1.513 -1.233 -1.249 D 178 176 3 179 3 0 0 89 167 -13.282 -3.316 -0.153 IL 179 179 3 179 3 1 1 103 183 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 60 ] 60 - C - - - ML 180 179 3 182 3 1 1 95 173 -5.276 -0.076 -5.276 -1.329 1.417 -1.482 -0.801 D 181 179 3 182 3 0 0 88 166 -13.282 -3.316 -0.153 IL 182 182 3 182 3 1 1 102 181 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 61 ] 61 - C - - - ML 183 182 3 185 3 1 1 93 172 -5.276 -0.076 -5.276 -1.329 1.417 -1.482 -0.801 D 184 182 3 185 3 0 0 86 164 -13.282 -3.316 -0.153 IL 185 185 3 185 3 1 1 100 179 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 62 ] 62 - C - - - ML 186 185 3 188 3 1 1 92 170 -5.276 -0.076 -5.276 -1.329 1.417 -1.482 -0.801 D 187 185 3 188 3 0 0 85 162 -13.282 -3.316 -0.153 IL 188 188 3 188 3 1 1 99 178 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 63 ] 63 - G - - - ML 189 188 3 191 3 1 1 90 168 -5.276 -0.076 -5.276 -1.264 -1.827 1.564 -1.535 D 190 188 3 191 3 0 0 83 160 -13.282 -3.316 -0.153 IL 191 191 3 191 3 1 1 97 176 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 64 ] 64 - A - - - ML 192 191 3 194 3 1 1 89 166 -5.276 -0.076 -5.276 1.487 -1.513 -1.233 -1.249 D 193 191 3 194 3 0 0 81 158 -13.282 -3.316 -0.153 IL 194 194 3 194 3 1 1 96 174 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 65 ] 65 - G - - - ML 195 194 3 197 3 1 1 87 164 -5.276 -0.076 -5.276 -1.264 -1.827 1.564 -1.535 D 196 194 3 197 3 0 0 80 156 -13.282 -3.316 -0.153 IL 197 197 3 197 3 1 1 94 172 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 66 ] 66 - U - - - ML 198 197 3 200 3 1 1 85 162 -5.276 -0.076 -5.276 -1.147 -0.906 -1.271 1.379 D 199 197 3 200 3 0 0 78 154 -13.282 -3.316 -0.153 IL 200 200 3 200 3 1 1 93 171 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 67 ] 67 - G - - - ML 201 200 3 203 3 1 1 84 160 -5.276 -0.076 -5.276 -1.264 -1.827 1.564 -1.535 D 202 200 3 203 3 0 0 76 152 -13.282 -3.316 -0.153 IL 203 203 3 203 3 1 1 91 169 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 68 ] 68 - C - - - ML 204 203 3 206 3 1 1 82 158 -5.276 -0.076 -5.276 -1.329 1.417 -1.482 -0.801 D 205 203 3 206 3 0 0 75 150 -13.282 -3.316 -0.153 IL 206 206 3 206 3 1 1 90 167 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 69 ] 69 - A - - - ML 207 206 3 209 3 1 1 81 156 -5.276 -0.076 -5.276 1.487 -1.513 -1.233 -1.249 D 208 206 3 209 3 0 0 73 148 -13.282 -3.316 -0.153 IL 209 209 3 209 3 1 1 88 165 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 70 ] 70 - A - - - ML 210 209 3 212 3 1 1 79 154 -5.276 -0.076 -5.276 1.487 -1.513 -1.233 -1.249 D 211 209 3 212 3 0 0 71 146 -13.282 -3.316 -0.153 IL 212 212 3 212 3 1 1 87 163 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 71 ] 71 - A - - - ML 213 212 3 215 3 1 1 77 152 -5.276 -0.076 -5.276 1.487 -1.513 -1.233 -1.249 D 214 212 3 215 3 0 0 69 144 -13.282 -3.316 -0.153 IL 215 215 3 215 3 1 1 85 161 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 72 ] 72 - U - - - ML 216 215 3 218 3 1 1 75 150 -5.276 -0.076 -5.276 -1.147 -0.906 -1.271 1.379 D 217 215 3 218 3 0 0 68 142 -13.282 -3.316 -0.153 IL 218 218 3 218 3 1 1 83 159 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 73 ] 73 - C - - - ML 219 218 3 221 3 1 1 74 148 -5.276 -0.076 -5.276 -1.329 1.417 -1.482 -0.801 D 220 218 3 221 3 0 0 66 139 -13.282 -3.316 -0.153 IL 221 221 3 221 3 1 1 82 157 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 74 ] 74 - G - - - ML 222 221 3 224 3 1 1 72 146 -5.276 -0.076 -5.276 -1.264 -1.827 1.564 -1.535 D 223 221 3 224 3 0 0 64 137 -13.282 -3.316 -0.153 IL 224 224 3 224 3 1 1 80 155 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 75 ] 75 - G - - - ML 225 224 3 227 3 1 1 70 144 -5.276 -0.076 -5.276 -1.264 -1.827 1.564 -1.535 D 226 224 3 227 3 0 0 62 135 -13.282 -3.316 -0.153 IL 227 227 3 227 3 1 1 78 153 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 76 ] 76 - G - - - ML 228 227 3 230 3 1 1 68 141 -5.276 -0.076 -5.276 -1.264 -1.827 1.564 -1.535 D 229 227 3 230 3 0 0 60 132 -13.282 -3.316 -0.153 IL 230 230 3 230 3 1 1 76 151 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 77 ] 77 - U - - - ML 231 230 3 233 3 1 1 66 139 -5.276 -0.076 -5.276 -1.147 -0.906 -1.271 1.379 D 232 230 3 233 3 0 0 57 129 -13.282 -3.316 -0.153 IL 233 233 3 233 3 1 1 75 148 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 78 ] 78 - G - - - ML 234 233 3 236 3 1 1 64 136 -5.276 -0.076 -5.276 -1.264 -1.827 1.564 -1.535 D 235 233 3 236 3 0 0 55 127 -13.282 -3.316 -0.153 IL 236 236 3 236 3 1 1 73 146 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 79 ] 79 - G - - - ML 237 236 3 239 3 1 1 62 133 -5.276 -0.076 -5.276 -1.264 -1.827 1.564 -1.535 D 238 236 3 239 3 0 0 52 123 -13.282 -3.316 -0.153 IL 239 239 3 239 3 1 1 71 143 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 80 ] 80 - C - - - ML 240 239 3 242 3 1 1 59 130 -5.276 -0.076 -5.276 -1.329 1.417 -1.482 -0.801 D 241 239 3 242 3 0 0 49 120 -13.282 -3.316 -0.153 IL 242 242 3 242 3 1 1 69 141 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 81 ] 81 - U - - - ML 243 242 3 245 3 1 1 57 127 -5.276 -0.076 -5.276 -1.147 -0.906 -1.271 1.379 D 244 242 3 245 3 0 0 46 116 -13.282 -3.316 -0.153 IL 245 245 3 245 3 1 1 67 138 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 82 ] 82 - U - - - ML 246 245 3 248 3 1 1 53 123 -5.276 -0.076 -5.276 -1.147 -0.906 -1.271 1.379 D 247 245 3 248 3 0 0 41 110 -13.282 -3.316 -0.153 IL 248 248 3 248 3 1 1 64 135 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 83 ] 83 - U - - - ML 249 248 3 251 3 1 1 49 118 -5.276 -0.076 -5.276 -1.147 -0.906 -1.271 1.379 D 250 248 3 251 3 0 0 27 97 -13.282 -3.316 -0.153 IL 251 251 3 251 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 84 ] 84 - U - - - ML 252 251 3 254 2 1 1 1 1 * 0.000 -1.147 -0.906 -1.271 1.379 D 253 251 3 254 2 0 0 0 0 * 0.000 IL 254 254 3 254 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 85 ] - - - - - - E 255 254 3 -1 0 0 0 0 0 // HMMER3/f [3.1b3 | July 2016] NAME CLUST_26 LENG 84 MAXL 174 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Wed Feb 7 22:46:36 2018 COM [1] cmbuild --noss -F selected_tracr_clust/CLUST_26.cm selected_tracr_clust/CLUST_26.aln COM [2] cmbuild --noss -F selected_tracr_clust/CLUST_26.cm selected_tracr_clust/CLUST_26.aln NSEQ 3 EFFN 2.370117 STATS LOCAL MSV -8.7703 0.71851 STATS LOCAL VITERBI -9.7573 0.71851 STATS LOCAL FORWARD -3.3330 0.71851 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.36963 1.43221 1.42592 1.32152 1.38629 1.38629 1.38629 1.38629 0.02684 4.93386 3.94868 0.39730 1.11515 0.00000 * 1 2.63211 0.27989 2.76374 2.21501 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04475 3.82212 3.82212 1.46634 0.26236 1.09861 0.40547 2 0.22942 2.80475 2.62427 2.63122 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04475 3.82212 3.82212 1.46634 0.26236 1.09861 0.40547 3 0.22942 2.80475 2.62427 2.63122 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04475 3.82212 3.82212 1.46634 0.26236 1.09861 0.40547 4 0.22942 2.80475 2.62427 2.63122 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04475 3.82212 3.82212 1.46634 0.26236 1.09861 0.40547 5 2.63211 0.27989 2.76374 2.21501 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04475 3.82212 3.82212 1.46634 0.26236 1.09861 0.40547 6 0.22942 2.80475 2.62427 2.63122 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04475 3.82212 3.82212 1.46634 0.26236 1.09861 0.40547 7 0.22942 2.80475 2.62427 2.63122 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04475 3.82212 3.82212 1.46634 0.26236 1.09861 0.40547 8 0.22942 2.80475 2.62427 2.63122 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04475 3.82212 3.82212 1.46634 0.26236 1.09861 0.40547 9 2.52257 3.01558 0.20950 2.81778 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04475 3.82212 3.82212 1.46634 0.26236 1.09861 0.40547 10 2.63211 0.27989 2.76374 2.21501 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04475 3.82212 3.82212 1.46634 0.26236 1.09861 0.40547 11 2.46611 2.25241 2.57287 0.30976 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04475 3.82212 3.82212 1.46634 0.26236 1.09861 0.40547 12 2.46611 2.25241 2.57287 0.30976 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04475 3.82212 3.82212 1.46634 0.26236 1.09861 0.40547 13 2.63211 0.27989 2.76374 2.21501 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04475 3.82212 3.82212 1.46634 0.26236 1.09861 0.40547 14 0.81622 2.20390 1.18199 1.95997 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04475 3.82212 3.82212 1.46634 0.26236 1.09861 0.40547 15 2.52257 3.01558 0.20950 2.81778 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04475 3.82212 3.82212 1.46634 0.26236 1.09861 0.40547 16 2.63211 0.27989 2.76374 2.21501 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04475 3.82212 3.82212 1.46634 0.26236 1.09861 0.40547 17 2.46611 2.25241 2.57287 0.30976 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04475 3.82212 3.82212 1.46634 0.26236 1.09861 0.40547 18 2.52257 3.01558 0.20950 2.81778 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04475 3.82212 3.82212 1.46634 0.26236 1.09861 0.40547 19 0.22942 2.80475 2.62427 2.63122 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04475 3.82212 3.82212 1.46634 0.26236 1.09861 0.40547 20 2.52257 3.01558 0.20950 2.81778 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04475 3.82212 3.82212 1.46634 0.26236 1.09861 0.40547 21 2.46611 2.25241 2.57287 0.30976 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04475 3.82212 3.82212 1.46634 0.26236 1.09861 0.40547 22 2.46611 2.25241 2.57287 0.30976 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04475 3.82212 3.82212 1.46634 0.26236 1.09861 0.40547 23 2.46611 2.25241 2.57287 0.30976 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04475 3.82212 3.82212 1.46634 0.26236 1.09861 0.40547 24 2.17676 0.72070 2.29829 1.20480 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04475 3.82212 3.82212 1.46634 0.26236 1.09861 0.40547 25 0.22942 2.80475 2.62427 2.63122 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04475 3.82212 3.82212 1.46634 0.26236 1.09861 0.40547 26 0.83836 1.97767 1.97007 1.23877 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04475 3.82212 3.82212 1.46634 0.26236 1.09861 0.40547 27 2.10395 1.27475 2.22015 0.71348 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04475 3.82212 3.82212 1.46634 0.26236 1.09861 0.40547 28 2.46611 2.25241 2.57287 0.30976 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04475 3.82212 3.82212 1.46634 0.26236 1.09861 0.40547 29 2.46611 2.25241 2.57287 0.30976 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04475 3.82212 3.82212 1.46634 0.26236 1.09861 0.40547 30 2.17676 0.72070 2.29829 1.20480 - c - - : 1.38629 1.38629 1.38629 1.38629 0.04475 3.82212 3.82212 1.46634 0.26236 1.09861 0.40547 31 2.46611 2.25241 2.57287 0.30976 - U - - : 1.38629 1.38629 1.38629 1.38629 0.21813 3.82212 1.74814 1.46634 0.26236 1.09861 0.40547 32 2.26220 2.65234 0.30226 2.45051 - G - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 33 0.35545 2.43498 2.24121 2.25177 - A - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 34 2.26220 2.65234 0.30226 2.45051 - G - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 35 2.30767 0.40426 2.41328 1.94130 - C - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 36 2.30767 0.40426 2.41328 1.94130 - C - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 37 2.30767 0.40426 2.41328 1.94130 - C - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 38 0.35545 2.43498 2.24121 2.25177 - A - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 39 2.18136 2.01437 2.26750 0.43057 - U - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 40 2.26220 2.65234 0.30226 2.45051 - G - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 41 2.18136 2.01437 2.26750 0.43057 - U - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 42 2.18136 2.01437 2.26750 0.43057 - U - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 43 2.26220 2.65234 0.30226 2.45051 - G - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 44 2.26220 2.65234 0.30226 2.45051 - G - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 45 2.26220 2.65234 0.30226 2.45051 - G - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 46 2.30767 0.40426 2.41328 1.94130 - C - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 47 2.30767 0.40426 2.41328 1.94130 - C - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 48 0.35545 2.43498 2.24121 2.25177 - A - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 49 2.18136 2.01437 2.26750 0.43057 - U - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 50 0.35545 2.43498 2.24121 2.25177 - A - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 51 2.30767 0.40426 2.41328 1.94130 - C - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 52 0.35545 2.43498 2.24121 2.25177 - A - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 53 2.18136 2.01437 2.26750 0.43057 - U - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 54 0.35545 2.43498 2.24121 2.25177 - A - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 55 2.18136 2.01437 2.26750 0.43057 - U - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 56 2.26220 2.65234 0.30226 2.45051 - G - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 57 2.30767 0.40426 2.41328 1.94130 - C - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 58 2.30767 0.40426 2.41328 1.94130 - C - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 59 0.35545 2.43498 2.24121 2.25177 - A - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 60 2.30767 0.40426 2.41328 1.94130 - C - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 61 2.30767 0.40426 2.41328 1.94130 - C - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 62 2.30767 0.40426 2.41328 1.94130 - C - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 63 2.26220 2.65234 0.30226 2.45051 - G - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 64 0.35545 2.43498 2.24121 2.25177 - A - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 65 2.26220 2.65234 0.30226 2.45051 - G - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 66 2.18136 2.01437 2.26750 0.43057 - U - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 67 2.26220 2.65234 0.30226 2.45051 - G - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 68 2.30767 0.40426 2.41328 1.94130 - C - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 69 0.35545 2.43498 2.24121 2.25177 - A - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 70 0.35545 2.43498 2.24121 2.25177 - A - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 71 0.35545 2.43498 2.24121 2.25177 - A - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 72 2.18136 2.01437 2.26750 0.43057 - U - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 73 2.30767 0.40426 2.41328 1.94130 - C - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 74 2.26220 2.65234 0.30226 2.45051 - G - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 75 2.26220 2.65234 0.30226 2.45051 - G - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 76 2.26220 2.65234 0.30226 2.45051 - G - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 77 2.18136 2.01437 2.26750 0.43057 - U - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 78 2.26220 2.65234 0.30226 2.45051 - G - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 79 2.26220 2.65234 0.30226 2.45051 - G - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 80 2.30767 0.40426 2.41328 1.94130 - C - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 81 2.18136 2.01437 2.26750 0.43057 - U - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 82 2.18136 2.01437 2.26750 0.43057 - U - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 83 2.18136 2.01437 2.26750 0.43057 - U - - : 1.38629 1.38629 1.38629 1.38629 0.05300 3.65699 3.65699 1.46634 0.26236 2.29822 0.10585 84 2.18136 2.01437 2.26750 0.43057 - U - - : 1.38629 1.38629 1.38629 1.38629 * 0.00000 * 0.45905 0.99935 0.00000 * // ==> CLUST_32.cm <== INFERNAL1/a [1.1.2 | July 2016] NAME CLUST_32 STATES 154 NODES 52 CLEN 50 W 124 ALPH RNA RF no CONS yes MAP yes DATE Wed Feb 7 22:46:37 2018 COM [1] cmbuild --noss -F selected_tracr_clust/CLUST_32.cm selected_tracr_clust/CLUST_32.aln PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 4 EFFN 4.000000 CKSUM 1426996377 NULL 0.000 0.000 0.000 0.000 EFP7GF -9.0974 0.72399 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 124 204 -7.615 -7.822 -0.033 -6.236 IL 1 1 2 1 4 1 14 126 206 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 13 125 206 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 1 13 124 204 -5.954 -0.047 -5.954 1.858 -3.177 -2.874 -2.965 D 4 2 3 5 3 0 9 121 201 -11.551 -1.585 -0.585 IL 5 5 3 5 3 1 14 131 212 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - A - - - ML 6 5 3 8 3 1 12 123 203 -5.954 -0.047 -5.954 1.858 -3.177 -2.874 -2.965 D 7 5 3 8 3 0 8 119 199 -11.551 -1.585 -0.585 IL 8 8 3 8 3 1 14 129 211 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - G - - - ML 9 8 3 11 3 1 11 121 201 -5.954 -0.047 -5.954 -2.318 -3.302 1.838 -3.028 D 10 8 3 11 3 0 7 118 198 -11.551 -1.585 -0.585 IL 11 11 3 11 3 1 13 128 209 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - C - - - ML 12 11 3 14 3 1 11 120 200 -5.954 -0.047 -5.954 -2.705 1.791 -2.944 -1.969 D 13 11 3 14 3 0 7 117 196 -11.551 -1.585 -0.585 IL 14 14 3 14 3 1 12 127 208 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - A - - - ML 15 14 3 17 3 1 10 119 198 -5.954 -0.047 -5.954 1.858 -3.177 -2.874 -2.965 D 16 14 3 17 3 0 6 115 195 -11.551 -1.585 -0.585 IL 17 17 3 17 3 1 11 126 206 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - G - - - ML 18 17 3 20 3 1 9 117 197 -5.954 -0.047 -5.954 -2.318 -3.302 1.838 -3.028 D 19 17 3 20 3 0 6 114 194 -11.551 -1.585 -0.585 IL 20 20 3 20 3 1 10 124 205 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - U - - - ML 21 20 3 23 3 1 8 116 195 -5.954 -0.047 -5.954 -1.604 0.039 -1.798 1.236 D 22 20 3 23 3 0 5 113 192 -11.551 -1.585 -0.585 IL 23 23 3 23 3 1 9 123 203 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - C - - - ML 24 23 3 26 3 1 7 115 194 -5.954 -0.047 -5.954 -1.778 1.224 -1.986 0.163 D 25 23 3 26 3 0 5 112 191 -11.551 -1.585 -0.585 IL 26 26 3 26 3 1 8 122 202 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - u - - - ML 27 26 3 29 3 1 6 113 192 -5.954 -0.302 -2.533 0.586 -1.160 -1.219 0.698 D 28 26 3 29 3 0 4 111 190 -11.551 -1.585 -0.585 IL 29 29 3 29 3 1 8 121 201 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - g - - - ML 30 29 3 32 3 1 5 112 191 -5.708 -0.056 -5.708 -0.953 -1.205 0.961 0.141 D 31 29 3 32 3 0 4 110 189 -13.634 -0.247 -2.669 IL 32 32 3 32 3 1 7 119 199 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - g - - - ML 33 32 3 35 3 1 4 111 190 -5.954 -0.306 -2.515 0.572 -1.746 0.875 -1.389 D 34 32 3 35 3 0 2 108 187 -11.551 -1.585 -0.585 IL 35 35 3 35 3 1 7 118 198 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - u - - - ML 36 35 3 38 3 1 4 110 188 -5.705 -0.056 -5.705 0.231 -0.963 -1.026 0.866 D 37 35 3 38 3 0 1 108 186 -13.650 -0.244 -2.684 IL 38 38 3 38 3 1 6 117 196 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - C - - - ML 39 38 3 41 3 1 4 108 187 -5.954 -0.047 -5.954 -2.705 1.791 -2.944 -1.969 D 40 38 3 41 3 0 0 105 183 -11.551 -1.585 -0.585 IL 41 41 3 41 3 1 5 115 195 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - U - - - ML 42 41 3 44 3 1 4 107 185 -5.954 -0.047 -5.954 -2.446 -1.984 -2.633 1.767 D 43 41 3 44 3 0 0 104 182 -11.551 -1.585 -0.585 IL 44 44 3 44 3 1 5 114 193 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - G - - - ML 45 44 3 47 3 1 3 105 184 -5.954 -0.047 -5.954 -2.318 -3.302 1.838 -3.028 D 46 44 3 47 3 0 0 102 180 -11.551 -1.585 -0.585 IL 47 47 3 47 3 1 4 113 192 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - C - - - ML 48 47 3 50 3 1 3 104 182 -5.954 -0.047 -5.954 -2.705 1.791 -2.944 -1.969 D 49 47 3 50 3 0 0 101 179 -11.551 -1.585 -0.585 IL 50 50 3 50 3 1 4 111 190 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - A - - - ML 51 50 3 53 3 1 2 103 181 -5.954 -0.047 -5.954 1.858 -3.177 -2.874 -2.965 D 52 50 3 53 3 0 0 99 177 -11.551 -1.585 -0.585 IL 53 53 3 53 3 1 3 110 189 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - C - - - ML 54 53 3 56 3 1 2 101 179 -5.954 -0.047 -5.954 -2.705 1.791 -2.944 -1.969 D 55 53 3 56 3 0 0 98 175 -11.551 -1.585 -0.585 IL 56 56 3 56 3 1 3 109 187 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - C - - - ML 57 56 3 59 3 1 2 100 177 -5.954 -0.047 -5.954 -2.705 1.791 -2.944 -1.969 D 58 56 3 59 3 0 0 97 174 -11.551 -1.585 -0.585 IL 59 59 3 59 3 1 3 107 186 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 20 - A - - - ML 60 59 3 62 3 1 1 98 176 -5.954 -0.047 -5.954 1.858 -3.177 -2.874 -2.965 D 61 59 3 62 3 0 0 95 172 -11.551 -1.585 -0.585 IL 62 62 3 62 3 1 2 106 184 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 21 - g - - - ML 63 62 3 65 3 1 1 97 174 -5.954 -0.047 -5.954 0.572 -1.746 0.875 -1.389 D 64 62 3 65 3 0 0 94 171 -11.551 -1.585 -0.585 IL 65 65 3 65 3 1 2 105 183 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 22 ] 22 - A - - - ML 66 65 3 68 3 1 1 96 173 -5.954 -0.047 -5.954 1.858 -3.177 -2.874 -2.965 D 67 65 3 68 3 0 0 92 169 -11.551 -1.585 -0.585 IL 68 68 3 68 3 1 2 103 181 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 23 - U - - - ML 69 68 3 71 3 1 1 94 171 -5.954 -0.047 -5.954 -2.446 -1.984 -2.633 1.767 D 70 68 3 71 3 0 0 91 167 -11.551 -1.585 -0.585 IL 71 71 3 71 3 1 1 102 180 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 24 - A - - - ML 72 71 3 74 3 1 1 93 169 -5.954 -0.047 -5.954 1.858 -3.177 -2.874 -2.965 D 73 71 3 74 3 0 0 90 166 -11.551 -1.585 -0.585 IL 74 74 3 74 3 1 1 101 178 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 25 - A - - - ML 75 74 3 77 3 1 1 91 168 -5.954 -0.047 -5.954 1.858 -3.177 -2.874 -2.965 D 76 74 3 77 3 0 0 88 164 -11.551 -1.585 -0.585 IL 77 77 3 77 3 1 1 99 176 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 26 - G - - - ML 78 77 3 80 3 1 1 90 166 -5.954 -0.047 -5.954 -2.318 -3.302 1.838 -3.028 D 79 77 3 80 3 0 0 87 162 -11.551 -1.585 -0.585 IL 80 80 3 80 3 1 1 98 175 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 27 - G - - - ML 81 80 3 83 3 1 1 89 165 -5.954 -0.047 -5.954 -2.318 -3.302 1.838 -3.028 D 82 80 3 83 3 0 0 85 161 -11.551 -1.585 -0.585 IL 83 83 3 83 3 1 1 96 173 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 28 - g - - - ML 84 83 3 86 3 1 1 87 163 -5.954 -0.047 -5.954 -1.256 0.608 0.654 -1.048 D 85 83 3 86 3 0 0 84 159 -11.551 -1.585 -0.585 IL 86 86 3 86 3 1 1 95 172 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 29 - C - - - ML 87 86 3 89 3 1 1 86 161 -5.954 -0.047 -5.954 -1.432 1.121 -0.009 -1.120 D 88 86 3 89 3 0 0 82 157 -11.551 -1.585 -0.585 IL 89 89 3 89 3 1 1 94 170 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 30 - G - - - ML 90 89 3 92 3 1 1 84 159 -5.954 -0.047 -5.954 -0.195 -2.153 1.387 -1.805 D 91 89 3 92 3 0 0 81 156 -11.551 -1.585 -0.585 IL 92 92 3 92 3 1 1 92 168 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 31 - G - - - ML 93 92 3 95 3 1 1 83 158 -5.954 -0.047 -5.954 -0.201 -2.156 1.390 -1.808 D 94 92 3 95 3 0 0 79 154 -11.551 -1.585 -0.585 IL 95 95 3 95 3 1 1 91 167 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 32 - c - - - ML 96 95 3 98 3 1 1 81 156 -5.954 -0.047 -5.954 0.032 0.416 -0.017 -0.612 D 97 95 3 98 3 0 0 78 152 -11.551 -1.585 -0.585 IL 98 98 3 98 3 1 1 89 165 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 33 ] 33 - G - - - ML 99 98 3 101 3 1 1 80 154 -5.954 -0.047 -5.954 -2.318 -3.302 1.838 -3.028 D 100 98 3 101 3 0 0 76 150 -11.551 -1.585 -0.585 IL 101 101 3 101 3 1 1 88 163 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 34 - C - - - ML 102 101 3 104 3 1 1 78 152 -5.954 -0.047 -5.954 -2.705 1.791 -2.944 -1.969 D 103 101 3 104 3 0 0 74 148 -11.551 -1.585 -0.585 IL 104 104 3 104 3 1 1 86 162 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 35 - U - - - ML 105 104 3 107 3 1 1 76 151 -5.954 -0.047 -5.954 -2.446 -1.984 -2.633 1.767 D 106 104 3 107 3 0 0 73 147 -11.551 -1.585 -0.585 IL 107 107 3 107 3 1 1 85 160 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 36 ] 36 - A - - - ML 108 107 3 110 3 1 1 75 149 -5.954 -0.047 -5.954 1.117 -0.034 -1.446 -1.035 D 109 107 3 110 3 0 0 71 145 -11.551 -1.585 -0.585 IL 110 110 3 110 3 1 1 83 158 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 37 ] 37 - C - - - ML 111 110 3 113 3 1 1 73 147 -5.954 -0.047 -5.954 -2.705 1.791 -2.944 -1.969 D 112 110 3 113 3 0 0 70 143 -11.551 -1.585 -0.585 IL 113 113 3 113 3 1 1 82 157 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 38 - G - - - ML 114 113 3 116 3 1 1 72 145 -5.954 -0.047 -5.954 -2.318 -3.302 1.838 -3.028 D 115 113 3 116 3 0 0 68 141 -11.551 -1.585 -0.585 IL 116 116 3 116 3 1 1 80 155 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 39 - G - - - ML 117 116 3 119 3 1 1 70 143 -5.954 -0.047 -5.954 -2.318 -3.302 1.838 -3.028 D 118 116 3 119 3 0 0 66 139 -11.551 -1.585 -0.585 IL 119 119 3 119 3 1 1 79 153 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 40 - C - - - ML 120 119 3 122 3 1 1 68 141 -5.954 -0.047 -5.954 -2.705 1.791 -2.944 -1.969 D 121 119 3 122 3 0 0 64 137 -11.551 -1.585 -0.585 IL 122 122 3 122 3 1 1 77 151 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 41 ] 41 - g - - - ML 123 122 3 125 3 1 1 67 139 -5.954 -0.047 -5.954 -1.256 0.604 0.658 -1.048 D 124 122 3 125 3 0 0 63 135 -11.551 -1.585 -0.585 IL 125 125 3 125 3 1 1 76 149 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 42 - C - - - ML 126 125 3 128 3 1 1 65 137 -5.954 -0.047 -5.954 -1.803 1.257 -2.014 0.105 D 127 125 3 128 3 0 0 61 132 -11.551 -1.585 -0.585 IL 128 128 3 128 3 1 1 74 147 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 43 - C - - - ML 129 128 3 131 3 1 1 63 135 -5.954 -0.047 -5.954 -1.801 1.254 -2.011 0.110 D 130 128 3 131 3 0 0 59 130 -11.551 -1.585 -0.585 IL 131 131 3 131 3 1 1 73 145 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 44 - G - - - ML 132 131 3 134 3 1 1 61 132 -5.954 -0.047 -5.954 -1.308 -0.176 1.203 -1.292 D 133 131 3 134 3 0 0 56 127 -11.551 -1.585 -0.585 IL 134 134 3 134 3 1 1 71 143 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 45 - g - - - ML 135 134 3 137 3 1 1 59 130 -5.954 -0.047 -5.954 -1.252 0.554 0.706 -1.055 D 136 134 3 137 3 0 0 54 125 -11.551 -1.585 -0.585 IL 137 137 3 137 3 1 1 69 141 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 46 - C - - - ML 138 137 3 140 3 1 1 57 127 -5.954 -0.047 -5.954 -1.778 1.224 -1.986 0.163 D 139 137 3 140 3 0 0 51 122 -11.551 -1.585 -0.585 IL 140 140 3 140 3 1 1 68 139 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 47 ] 47 - U - - - ML 141 140 3 143 3 1 1 54 125 -5.954 -0.047 -5.954 -2.446 -1.984 -2.633 1.767 D 142 140 3 143 3 0 0 48 118 -11.551 -1.585 -0.585 IL 143 143 3 143 3 1 1 66 137 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 48 - U - - - ML 144 143 3 146 3 1 1 51 121 -5.954 -0.047 -5.954 -2.446 -1.984 -2.633 1.767 D 145 143 3 146 3 0 0 44 113 -11.551 -1.585 -0.585 IL 146 146 3 146 3 1 1 64 134 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 49 - U - - - ML 147 146 3 149 3 1 1 48 117 -5.954 -0.325 -2.428 -2.446 -1.984 -2.633 1.767 D 148 146 3 149 3 0 0 32 101 -11.551 -1.585 -0.585 IL 149 149 3 149 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 50 ] 50 - U - - - ML 150 149 3 152 2 1 1 1 1 * 0.000 -1.890 -1.524 -2.060 1.652 D 151 149 3 152 2 0 0 0 0 * 0.000 IL 152 152 3 152 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 51 ] - - - - - - E 153 152 3 -1 0 0 0 0 0 // HMMER3/f [3.1b3 | July 2016] NAME CLUST_32 LENG 50 MAXL 124 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Wed Feb 7 22:46:37 2018 COM [1] cmbuild --noss -F selected_tracr_clust/CLUST_32.cm selected_tracr_clust/CLUST_32.aln COM [2] cmbuild --noss -F selected_tracr_clust/CLUST_32.cm selected_tracr_clust/CLUST_32.aln NSEQ 4 EFFN 4.000000 STATS LOCAL MSV -7.4408 0.72399 STATS LOCAL VITERBI -8.4380 0.72399 STATS LOCAL FORWARD -3.8667 0.72399 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.42136 1.31049 1.30716 1.52171 1.38629 1.38629 1.38629 1.38629 0.01894 5.27846 4.29328 0.39730 1.11515 0.00000 * 1 0.09846 3.58835 3.37856 3.44116 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 2 0.09846 3.58835 3.37856 3.44116 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 3 2.99290 3.67523 0.11220 3.48524 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 4 3.26153 0.14464 3.42672 2.75134 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 5 0.09846 3.58835 3.37856 3.44116 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 6 2.99290 3.67523 0.11220 3.48524 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 7 2.49803 1.35915 2.63285 0.52933 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 8 2.61846 0.53762 2.76308 1.27349 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 9 0.98033 2.19011 2.23137 0.90257 - u - - : 1.38629 1.38629 1.38629 1.38629 0.20944 4.12713 1.75544 1.46634 0.26236 1.09861 0.40547 10 2.04663 2.22173 0.71988 1.28881 - g - - : 1.38629 1.38629 1.38629 1.38629 0.03900 3.95670 3.95670 1.46634 0.26236 0.17113 1.84968 11 0.98992 2.59653 0.78005 2.34882 - g - - : 1.38629 1.38629 1.38629 1.38629 0.21211 4.12713 1.74301 1.46634 0.26236 1.09861 0.40547 12 1.22647 2.05389 2.09780 0.78589 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03911 3.95413 3.95413 1.46634 0.26236 0.16918 1.86016 13 3.26153 0.14464 3.42672 2.75134 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 14 3.08173 2.76116 3.21166 0.16180 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 15 2.99290 3.67523 0.11220 3.48524 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 16 3.26153 0.14464 3.42672 2.75134 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 17 0.09846 3.58835 3.37856 3.44116 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 18 3.26153 0.14464 3.42672 2.75134 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 19 3.26153 0.14464 3.42672 2.75134 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 20 0.09846 3.58835 3.37856 3.44116 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 21 0.98992 2.59653 0.78005 2.34882 - g - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 22 0.09846 3.58835 3.37856 3.44116 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 23 3.08173 2.76116 3.21166 0.16180 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 24 0.09846 3.58835 3.37856 3.44116 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 25 0.09846 3.58835 3.37856 3.44116 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 26 2.99290 3.67523 0.11220 3.48524 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 27 2.99290 3.67523 0.11220 3.48524 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 28 2.25715 0.96456 0.93320 2.11271 - g - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 29 2.37921 0.60905 1.39245 2.16247 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 30 1.52148 2.87845 0.42492 2.63715 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 31 1.52556 2.88082 0.42309 2.63960 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 32 1.36418 1.09765 1.39783 1.81018 - c - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 33 2.99290 3.67523 0.11220 3.48524 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 34 3.26153 0.14464 3.42672 2.75134 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 35 3.08173 2.76116 3.21166 0.16180 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 36 0.61230 1.41006 2.38874 2.10351 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 37 3.26153 0.14464 3.42672 2.75134 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 38 2.99290 3.67523 0.11220 3.48524 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 39 2.99290 3.67523 0.11220 3.48524 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 40 3.26153 0.14464 3.42672 2.75134 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 41 2.25689 0.96738 0.93045 2.11301 - g - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 42 2.63636 0.51469 2.78235 1.31379 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 43 2.63454 0.51694 2.78040 1.30974 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 44 2.29318 1.50830 0.55219 2.28198 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 45 2.25430 1.00244 0.89715 2.11745 - g - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 46 2.61846 0.53762 2.76308 1.27349 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 47 3.08173 2.76116 3.21166 0.16180 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 48 3.08173 2.76116 3.21166 0.16180 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03279 4.12713 4.12713 1.46634 0.26236 1.09861 0.40547 49 3.08173 2.76116 3.21166 0.16180 - U - - : 1.38629 1.38629 1.38629 1.38629 0.22556 4.12713 1.68308 1.46634 0.26236 1.09861 0.40547 50 2.69638 2.44292 2.81389 0.24122 - U - - : 1.38629 1.38629 1.38629 1.38629 * 0.00000 * 0.45905 0.99935 0.00000 * // ==> CLUST_36.cm <== INFERNAL1/a [1.1.2 | July 2016] NAME CLUST_36 STATES 187 NODES 63 CLEN 61 W 132 ALPH RNA RF no CONS yes MAP yes DATE Wed Feb 7 22:46:37 2018 COM [1] cmbuild --noss -F selected_tracr_clust/CLUST_36.cm selected_tracr_clust/CLUST_36.aln PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 13 EFFN 6.896729 CKSUM 3411384519 NULL 0.000 0.000 0.000 0.000 EFP7GF -12.1348 0.71891 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 132 211 -8.217 -8.424 -0.022 -6.839 IL 1 1 2 1 4 1 18 134 213 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 17 133 213 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 1 18 132 212 -6.507 -0.032 -6.507 1.944 -4.549 -4.046 -4.376 D 4 2 3 5 3 0 12 129 208 -11.551 -1.585 -0.585 IL 5 5 3 5 3 1 19 139 220 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - A - - - ML 6 5 3 8 3 1 17 131 210 -6.507 -0.032 -6.507 1.944 -4.549 -4.046 -4.376 D 7 5 3 8 3 0 11 128 207 -11.551 -1.585 -0.585 IL 8 8 3 8 3 1 18 138 218 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - G - - - ML 9 8 3 11 3 1 16 129 209 -6.507 -0.032 -6.507 -3.130 -4.351 1.917 -4.079 D 10 8 3 11 3 0 11 126 206 -11.551 -1.585 -0.585 IL 11 11 3 11 3 1 18 137 217 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - G - - - ML 12 11 3 14 3 1 16 128 208 -6.507 -0.032 -6.507 -3.130 -4.351 1.917 -4.079 D 13 11 3 14 3 0 10 125 204 -11.551 -1.585 -0.585 IL 14 14 3 14 3 1 17 135 216 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - A - - - ML 15 14 3 17 3 1 15 127 206 -6.507 -0.032 -6.507 1.944 -4.549 -4.046 -4.376 D 16 14 3 17 3 0 10 124 203 -11.551 -1.585 -0.585 IL 17 17 3 17 3 1 16 134 214 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - U - - - ML 18 17 3 20 3 1 14 126 205 -6.507 -0.032 -6.507 -3.576 -2.946 -3.782 1.893 D 19 17 3 20 3 0 9 123 202 -11.551 -1.585 -0.585 IL 20 20 3 20 3 1 16 133 213 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - U - - - ML 21 20 3 23 3 1 14 124 204 -2.953 -0.218 -6.507 -3.576 -2.946 -3.782 1.893 D 22 20 3 23 3 0 8 121 200 -11.551 -1.585 -0.585 IL 23 23 3 23 3 1 15 125 204 -0.991 -1.009 -14.409 0.000 0.000 0.000 0.000 [ MATL 8 ] 10 - A - - - ML 24 23 3 26 3 1 13 123 202 -6.507 -0.032 -6.507 1.584 -2.920 -0.505 -2.598 D 25 23 3 26 3 0 8 120 199 -11.551 -1.585 -0.585 IL 26 26 3 26 3 1 14 130 210 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 11 - U - - - ML 27 26 3 29 3 1 12 122 201 -6.507 -0.032 -6.507 -3.576 -2.946 -3.782 1.893 D 28 26 3 29 3 0 7 119 198 -11.551 -1.585 -0.585 IL 29 29 3 29 3 1 14 129 209 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 12 - U - - - ML 30 29 3 32 3 1 12 121 199 -6.507 -0.032 -6.507 -3.576 -2.946 -3.782 1.893 D 31 29 3 32 3 0 7 118 196 -11.551 -1.585 -0.585 IL 32 32 3 32 3 1 13 128 208 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 13 - C - - - ML 33 32 3 35 3 1 11 119 198 -6.507 -0.032 -6.507 -3.701 1.896 -3.968 -2.867 D 34 32 3 35 3 0 6 116 195 -11.551 -1.585 -0.585 IL 35 35 3 35 3 1 13 127 206 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 12 ] 14 - C - - - ML 36 35 3 38 3 1 11 118 197 -6.507 -0.032 -6.507 -3.701 1.896 -3.968 -2.867 D 37 35 3 38 3 0 6 115 194 -11.551 -1.585 -0.585 IL 38 38 3 38 3 1 12 125 205 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 15 - G - - - ML 39 38 3 41 3 1 10 117 195 -6.507 -0.032 -6.507 -3.130 -4.351 1.917 -4.079 D 40 38 3 41 3 0 5 114 192 -11.551 -1.585 -0.585 IL 41 41 3 41 3 1 11 124 204 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 16 - U - - - ML 42 41 3 44 3 1 10 116 194 -6.507 -0.032 -6.507 -3.576 -2.946 -3.782 1.893 D 43 41 3 44 3 0 5 113 191 -11.551 -1.585 -0.585 IL 44 44 3 44 3 1 11 123 202 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 17 - U - - - ML 45 44 3 47 3 1 9 114 193 -6.507 -0.032 -6.507 -3.576 -2.946 -3.782 1.893 D 46 44 3 47 3 0 4 111 189 -11.551 -1.585 -0.585 IL 47 47 3 47 3 1 10 122 201 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 18 - G - - - ML 48 47 3 50 3 1 9 113 191 -6.507 -0.032 -6.507 -3.130 -4.351 1.917 -4.079 D 49 47 3 50 3 0 4 110 188 -11.551 -1.585 -0.585 IL 50 50 3 50 3 1 10 121 200 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 19 - U - - - ML 51 50 3 53 3 1 8 112 190 -6.507 -0.032 -6.507 -3.576 -2.946 -3.782 1.893 D 52 50 3 53 3 0 3 109 187 -11.551 -1.585 -0.585 IL 53 53 3 53 3 1 9 119 198 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 18 ] 20 - G - - - ML 54 53 3 56 3 1 8 111 188 -6.507 -0.032 -6.507 -3.130 -4.351 1.917 -4.079 D 55 53 3 56 3 0 3 108 185 -11.551 -1.585 -0.585 IL 56 56 3 56 3 1 9 118 197 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 21 - A - - - ML 57 56 3 59 3 1 7 109 187 -6.507 -0.032 -6.507 1.745 -2.722 -2.985 -1.436 D 58 56 3 59 3 0 2 106 184 -11.551 -1.585 -0.585 IL 59 59 3 59 3 1 8 117 196 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 22 - A - - - ML 60 59 3 62 3 1 7 108 186 -6.507 -0.032 -6.507 1.944 -4.549 -4.046 -4.376 D 61 59 3 62 3 0 2 105 182 -11.551 -1.585 -0.585 IL 62 62 3 62 3 1 8 116 194 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 23 - A - - - ML 63 62 3 65 3 1 6 107 184 -6.507 -0.032 -6.507 1.944 -4.549 -4.046 -4.376 D 64 62 3 65 3 0 1 104 181 -11.551 -1.585 -0.585 IL 65 65 3 65 3 1 7 114 193 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 22 ] 24 - A - - - ML 66 65 3 68 3 1 6 106 183 -6.507 -0.032 -6.507 1.944 -4.549 -4.046 -4.376 D 67 65 3 68 3 0 1 103 180 -11.551 -1.585 -0.585 IL 68 68 3 68 3 1 7 113 191 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 25 - C - - - ML 69 68 3 71 3 1 5 104 182 -6.507 -0.032 -6.507 -3.701 1.896 -3.968 -2.867 D 70 68 3 71 3 0 1 101 178 -11.551 -1.585 -0.585 IL 71 71 3 71 3 1 6 112 190 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 26 - A - - - ML 72 71 3 74 3 1 5 103 180 -6.507 -0.032 -6.507 1.944 -4.549 -4.046 -4.376 D 73 71 3 74 3 0 0 100 177 -11.551 -1.585 -0.585 IL 74 74 3 74 3 1 6 111 189 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 27 - U - - - ML 75 74 3 77 3 1 4 102 179 -6.507 -0.032 -6.507 -3.576 -2.946 -3.782 1.893 D 76 74 3 77 3 0 0 99 175 -11.551 -1.585 -0.585 IL 77 77 3 77 3 1 5 109 187 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 28 - U - - - ML 78 77 3 80 3 1 4 100 177 -6.507 -0.032 -6.507 -2.620 -0.413 -2.856 1.560 D 79 77 3 80 3 0 0 97 174 -11.551 -1.585 -0.585 IL 80 80 3 80 3 1 5 108 186 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 29 - U - - - ML 81 80 3 83 3 1 3 99 176 -6.507 -0.032 -6.507 -2.535 -0.126 -2.764 1.467 D 82 80 3 83 3 0 0 96 173 -11.551 -1.585 -0.585 IL 83 83 3 83 3 1 4 107 185 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 30 - A - - - ML 84 83 3 86 3 1 2 98 174 -6.507 -0.032 -6.507 1.944 -4.549 -4.046 -4.376 D 85 83 3 86 3 0 0 95 171 -11.551 -1.585 -0.585 IL 86 86 3 86 3 1 3 106 183 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 31 - A - - - ML 87 86 3 89 3 1 1 97 173 -6.507 -0.119 -3.880 1.770 -3.428 -1.381 -3.146 D 88 86 3 89 3 0 0 94 170 -11.551 -1.585 -0.585 IL 89 89 3 89 3 1 4 105 182 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 32 - G - - - ML 90 89 3 92 3 1 2 95 172 -6.423 -0.034 -6.423 0.164 -2.692 1.338 -2.343 D 91 89 3 92 3 0 0 92 168 -12.997 -3.032 -0.188 IL 92 92 3 92 3 1 3 103 181 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 33 - G - - - ML 93 92 3 95 3 1 2 94 170 -6.423 -0.034 -6.423 -0.872 -1.521 1.516 -2.030 D 94 92 3 95 3 0 0 92 168 -12.997 -0.405 -2.032 IL 95 95 3 95 3 1 2 102 179 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 34 - C - - - ML 96 95 3 98 3 1 1 93 169 -6.507 -0.032 -6.507 -1.862 1.317 -1.009 -0.441 D 97 95 3 98 3 0 0 90 165 -11.551 -1.585 -0.585 IL 98 98 3 98 3 1 2 101 178 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 33 ] 35 - G - - - ML 99 98 3 101 3 1 1 91 167 -6.507 -0.032 -6.507 -3.130 -4.351 1.917 -4.079 D 100 98 3 101 3 0 0 88 164 -11.551 -1.585 -0.585 IL 101 101 3 101 3 1 2 99 176 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 36 - G - - - ML 102 101 3 104 3 1 1 90 166 -6.507 -0.032 -6.507 -2.056 -0.869 1.596 -2.407 D 103 101 3 104 3 0 0 87 162 -11.551 -1.585 -0.585 IL 104 104 3 104 3 1 2 98 175 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 37 - c - - - ML 105 104 3 107 3 1 1 89 164 -6.507 -0.032 -6.507 -2.058 0.835 0.756 -1.800 D 106 104 3 107 3 0 0 86 161 -11.551 -1.585 -0.585 IL 107 107 3 107 3 1 1 97 173 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 36 ] 38 - g - - - ML 108 107 3 110 3 1 1 87 163 -6.507 -0.032 -6.507 -0.260 -0.264 0.585 -0.265 D 109 107 3 110 3 0 0 84 159 -11.551 -1.585 -0.585 IL 110 110 3 110 3 1 1 96 172 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 37 ] 39 - c - - - ML 111 110 3 113 3 1 1 86 161 -6.507 -0.444 -1.977 -0.304 0.483 -0.378 0.033 D 112 110 3 113 3 0 0 83 158 -11.551 -1.585 -0.585 IL 113 113 3 113 3 1 1 95 171 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 40 - g - - - ML 114 113 3 116 3 1 1 85 160 -6.105 -0.043 -6.105 -0.951 -0.095 0.627 0.003 D 115 113 3 116 3 0 0 81 156 -14.616 -4.650 -0.059 IL 116 116 3 116 3 1 1 94 170 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 41 - a - - - ML 117 116 3 119 3 1 1 84 159 -6.105 -0.137 -3.720 0.376 0.169 -1.093 0.149 D 118 116 3 119 3 0 0 81 155 -14.616 -4.650 -0.059 IL 119 119 3 119 3 1 1 92 168 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 42 - c - - - ML 120 119 3 122 3 1 1 82 157 -0.947 -1.692 -2.542 0.067 0.193 -0.020 -0.282 D 121 119 3 122 3 0 0 81 155 -14.841 -0.102 -3.875 IL 122 122 3 122 3 1 2 83 157 -1.476 -0.643 -15.635 0.000 0.000 0.000 0.000 [ MATL 41 ] 45 - A - - - ML 123 122 3 125 3 1 1 81 156 -6.338 -0.106 -4.095 1.151 -2.247 0.379 -1.898 D 124 122 3 125 3 0 0 77 151 -13.677 -3.711 -0.115 IL 125 125 3 125 3 1 1 89 165 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 46 - a - - - ML 126 125 3 128 3 1 1 80 154 -6.269 -0.038 -6.269 0.589 -1.169 0.093 -0.023 D 127 125 3 128 3 0 0 77 151 -14.039 -1.830 -0.476 IL 128 128 3 128 3 1 1 88 163 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 47 - g - - - ML 129 128 3 131 3 1 1 78 152 -6.338 -0.036 -6.338 -1.210 0.287 0.698 -0.464 D 130 128 3 131 3 0 0 76 150 -13.677 -0.239 -2.711 IL 131 131 3 131 3 1 1 87 162 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 48 - U - - - ML 132 131 3 134 3 1 1 77 151 -6.507 -0.032 -6.507 -3.576 -2.946 -3.782 1.893 D 133 131 3 134 3 0 0 73 147 -11.551 -1.585 -0.585 IL 134 134 3 134 3 1 1 85 160 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 49 - c - - - ML 135 134 3 137 3 1 1 75 149 -6.507 -0.032 -6.507 -0.084 0.913 -1.616 -0.239 D 136 134 3 137 3 0 0 72 146 -11.551 -1.585 -0.585 IL 137 137 3 137 3 1 1 84 159 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 50 - g - - - ML 138 137 3 140 3 1 1 74 147 -6.507 -0.032 -6.507 0.250 -1.799 0.997 -0.923 D 139 137 3 140 3 0 0 71 144 -11.551 -1.585 -0.585 IL 140 140 3 140 3 1 1 83 157 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 47 ] 51 - C - - - ML 141 140 3 143 3 1 1 72 146 -6.507 -0.119 -3.880 -2.745 1.424 -2.997 0.061 D 142 140 3 143 3 0 0 69 142 -11.551 -1.585 -0.585 IL 143 143 3 143 3 1 1 81 156 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 52 - c - - - ML 144 143 3 146 3 1 1 71 144 -6.423 -0.034 -6.423 -0.016 0.422 -1.361 0.358 D 145 143 3 146 3 0 0 68 141 -12.997 -3.032 -0.188 IL 146 146 3 146 3 1 1 80 154 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 53 - U - - - ML 147 146 3 149 3 1 1 70 143 -6.423 -0.034 -6.423 -0.021 -0.685 -1.438 1.017 D 148 146 3 149 3 0 0 67 140 -12.997 -0.405 -2.032 IL 149 149 3 149 3 1 1 79 153 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 50 ] 54 - U - - - ML 150 149 3 152 3 1 1 68 141 -6.507 -0.032 -6.507 -2.620 -0.413 -2.856 1.560 D 151 149 3 152 3 0 0 64 137 -11.551 -1.585 -0.585 IL 152 152 3 152 3 1 1 77 151 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 51 ] 55 - U - - - ML 153 152 3 155 3 1 1 66 139 -6.507 -0.309 -2.458 -1.386 -0.608 -0.433 1.151 D 154 152 3 155 3 0 0 62 134 -11.551 -1.585 -0.585 IL 155 155 3 155 3 1 1 76 150 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 52 ] 56 - u - - - ML 156 155 3 158 3 1 1 66 138 -6.237 -0.198 -3.122 -1.048 0.326 -0.235 0.499 D 157 155 3 158 3 0 0 56 127 -14.180 -4.214 -0.080 IL 158 158 3 158 3 1 1 75 149 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 53 ] 57 - u - - - ML 159 158 3 161 3 1 1 64 136 -6.082 -0.043 -6.082 -0.286 -0.138 -0.124 0.437 D 160 158 3 161 3 0 0 53 124 -14.678 -4.712 -0.056 IL 161 161 3 161 3 1 1 74 147 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 54 ] 58 - u - - - ML 162 161 3 164 3 1 1 62 134 -6.082 -0.043 -6.082 -0.040 -1.048 0.282 0.410 D 163 161 3 164 3 0 0 51 122 -14.678 -4.712 -0.056 IL 164 164 3 164 3 1 1 72 145 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 55 ] 59 - g - - - ML 165 164 3 167 3 1 1 61 132 -6.082 -0.130 -3.804 0.072 -1.462 0.982 -0.711 D 166 164 3 167 3 0 0 49 120 -14.678 -4.712 -0.056 IL 167 167 3 167 3 1 1 71 143 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 56 ] 60 - G - - - ML 168 167 3 170 3 1 1 59 130 -5.998 -0.046 -5.998 -1.200 -1.450 1.008 0.248 D 169 167 3 170 3 0 0 46 116 -14.876 -4.910 -0.049 IL 170 170 3 170 3 1 1 69 141 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 57 ] 61 - c - - - ML 171 170 3 173 3 1 1 57 127 -5.998 -0.046 -5.998 -0.901 0.502 -0.054 0.118 D 172 170 3 173 3 0 0 43 113 -14.876 -4.910 -0.049 IL 173 173 3 173 3 1 1 68 139 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 58 ] 62 - C - - - ML 174 173 3 176 3 1 1 54 124 -5.998 -0.046 -5.998 -1.744 1.083 -1.948 0.404 D 175 173 3 176 3 0 0 40 110 -14.876 -4.910 -0.049 IL 176 176 3 176 3 1 1 66 137 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 59 ] 63 - U - - - ML 177 176 3 179 3 1 1 51 121 -5.998 -0.148 -3.612 -1.412 -1.400 -0.494 1.342 D 178 176 3 179 3 0 0 35 105 -14.876 -4.910 -0.049 IL 179 179 3 179 3 1 1 64 134 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 60 ] 64 - U - - - ML 180 179 3 182 3 1 1 48 117 -5.899 -0.049 -5.899 -1.503 0.174 -1.693 1.144 D 181 179 3 182 3 0 0 23 92 -15.066 -5.100 -0.043 IL 182 182 3 182 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 61 ] 65 - u - - - ML 183 182 3 185 2 1 1 1 1 * 0.000 0.072 -0.920 0.092 0.438 D 184 182 3 185 2 0 0 0 0 * 0.000 IL 185 185 3 185 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 62 ] - - - - - - E 186 185 3 -1 0 0 0 0 0 // HMMER3/f [3.1b3 | July 2016] NAME CLUST_36 LENG 61 MAXL 132 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Wed Feb 7 22:46:37 2018 COM [1] cmbuild --noss -F selected_tracr_clust/CLUST_36.cm selected_tracr_clust/CLUST_36.aln COM [2] cmbuild --noss -F selected_tracr_clust/CLUST_36.cm selected_tracr_clust/CLUST_36.aln NSEQ 13 EFFN 6.896729 STATS LOCAL MSV -7.7397 0.71891 STATS LOCAL VITERBI -8.5743 0.71891 STATS LOCAL FORWARD -3.8570 0.71891 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.31022 1.68217 1.41174 1.20214 1.38629 1.38629 1.38629 1.38629 0.01244 5.69589 4.71072 0.39730 1.11515 0.00000 * 1 0.03858 4.53970 4.19110 4.41974 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02223 4.51050 4.51050 1.46634 0.26236 1.09861 0.40547 2 0.03858 4.53970 4.19110 4.41974 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02223 4.51050 4.51050 1.46634 0.26236 1.09861 0.40547 3 3.55608 4.40228 0.05719 4.21392 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02223 4.51050 4.51050 1.46634 0.26236 1.09861 0.40547 4 3.55608 4.40228 0.05719 4.21392 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02223 4.51050 4.51050 1.46634 0.26236 1.09861 0.40547 5 0.03858 4.53970 4.19110 4.41974 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02223 4.51050 4.51050 1.46634 0.26236 1.09861 0.40547 6 3.86476 3.42800 4.00787 0.07428 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02223 4.51050 4.51050 1.46634 0.26236 1.09861 0.40547 7 3.86476 3.42800 4.00787 0.07428 - U - - : 1.38629 1.38629 1.38629 1.38629 0.15101 2.04665 4.51050 0.69960 0.68673 1.09861 0.40547 8 0.28838 3.41039 1.73605 3.18731 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02223 4.51050 4.51050 1.46634 0.26236 1.09861 0.40547 9 3.86476 3.42800 4.00787 0.07428 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02223 4.51050 4.51050 1.46634 0.26236 1.09861 0.40547 10 3.86476 3.42800 4.00787 0.07428 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02223 4.51050 4.51050 1.46634 0.26236 1.09861 0.40547 11 3.95158 0.07200 4.13636 3.37358 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02223 4.51050 4.51050 1.46634 0.26236 1.09861 0.40547 12 3.95158 0.07200 4.13636 3.37358 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02223 4.51050 4.51050 1.46634 0.26236 1.09861 0.40547 13 3.55608 4.40228 0.05719 4.21392 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02223 4.51050 4.51050 1.46634 0.26236 1.09861 0.40547 14 3.86476 3.42800 4.00787 0.07428 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02223 4.51050 4.51050 1.46634 0.26236 1.09861 0.40547 15 3.86476 3.42800 4.00787 0.07428 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02223 4.51050 4.51050 1.46634 0.26236 1.09861 0.40547 16 3.55608 4.40228 0.05719 4.21392 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02223 4.51050 4.51050 1.46634 0.26236 1.09861 0.40547 17 3.86476 3.42800 4.00787 0.07428 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02223 4.51050 4.51050 1.46634 0.26236 1.09861 0.40547 18 3.55608 4.40228 0.05719 4.21392 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02223 4.51050 4.51050 1.46634 0.26236 1.09861 0.40547 19 0.17660 3.27294 3.45532 2.38150 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02223 4.51050 4.51050 1.46634 0.26236 1.09861 0.40547 20 0.03858 4.53970 4.19110 4.41974 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02223 4.51050 4.51050 1.46634 0.26236 1.09861 0.40547 21 0.03858 4.53970 4.19110 4.41974 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02223 4.51050 4.51050 1.46634 0.26236 1.09861 0.40547 22 0.03858 4.53970 4.19110 4.41974 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02223 4.51050 4.51050 1.46634 0.26236 1.09861 0.40547 23 3.95158 0.07200 4.13636 3.37358 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02223 4.51050 4.51050 1.46634 0.26236 1.09861 0.40547 24 0.03858 4.53970 4.19110 4.41974 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02223 4.51050 4.51050 1.46634 0.26236 1.09861 0.40547 25 3.86476 3.42800 4.00787 0.07428 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02223 4.51050 4.51050 1.46634 0.26236 1.09861 0.40547 26 3.20234 1.67251 3.36614 0.30512 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02223 4.51050 4.51050 1.46634 0.26236 1.09861 0.40547 27 3.14318 1.47348 3.30241 0.36971 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02223 4.51050 4.51050 1.46634 0.26236 1.09861 0.40547 28 0.03858 4.53970 4.19110 4.41974 - A - - : 1.38629 1.38629 1.38629 1.38629 0.02223 4.51050 4.51050 1.46634 0.26236 1.09861 0.40547 29 0.15956 3.76214 2.34345 3.56671 - A - - : 1.38629 1.38629 1.38629 1.38629 0.08218 4.51050 2.68975 1.46634 0.26236 1.09861 0.40547 30 1.27273 3.25218 0.45889 3.01062 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02359 4.45191 4.45191 1.46634 0.26236 2.10126 0.13045 31 1.99052 2.44034 0.33544 2.79326 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02359 4.45191 4.45191 1.46634 0.26236 0.28051 1.40811 32 2.67670 0.47352 2.08595 1.69164 - C - - : 1.38629 1.38629 1.38629 1.38629 0.02223 4.51050 4.51050 1.46634 0.26236 1.09861 0.40547 33 3.55608 4.40228 0.05719 4.21392 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02223 4.51050 4.51050 1.46634 0.26236 1.09861 0.40547 34 2.81123 1.98849 0.27992 3.05502 - G - - : 1.38629 1.38629 1.38629 1.38629 0.02223 4.51050 4.51050 1.46634 0.26236 1.09861 0.40547 35 2.81304 0.80760 0.86210 2.63420 - c - - : 1.38629 1.38629 1.38629 1.38629 0.02223 4.51050 4.51050 1.46634 0.26236 1.09861 0.40547 36 1.56664 1.56963 0.98048 1.57021 - g - - : 1.38629 1.38629 1.38629 1.38629 0.02223 4.51050 4.51050 1.46634 0.26236 1.09861 0.40547 37 1.59720 1.05182 1.64813 1.36326 - c - - : 1.38629 1.38629 1.38629 1.38629 0.30800 4.51050 1.37007 1.46634 0.26236 1.09861 0.40547 38 2.04533 1.45206 0.95183 1.38414 - g - - : 1.38629 1.38629 1.38629 1.38629 0.02948 4.23198 4.23198 1.46634 0.26236 3.22342 0.04063 39 1.12547 1.26904 2.14393 1.28300 - a - - : 1.38629 1.38629 1.38629 1.38629 0.09477 4.23198 2.57845 1.46634 0.26236 3.22342 0.04063 40 1.33969 1.25241 1.40004 1.58147 - c - - : 1.38629 1.38629 1.38629 1.38629 1.17292 0.65610 1.76221 0.44546 1.02313 0.07060 2.68578 41 0.58830 2.94411 1.12391 2.70198 - A - - : 1.38629 1.38629 1.38629 1.38629 0.07351 4.39288 2.83855 1.46634 0.26236 2.57218 0.07944 42 0.97807 2.19674 1.32168 1.40197 - a - - : 1.38629 1.38629 1.38629 1.38629 0.02627 4.34563 4.34563 1.46634 0.26236 1.26861 0.33020 43 2.22521 1.18722 0.90226 1.70795 - g - - : 1.38629 1.38629 1.38629 1.38629 0.02504 4.39288 4.39288 1.46634 0.26236 0.16574 1.87904 44 3.86476 3.42800 4.00787 0.07428 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02223 4.51050 4.51050 1.46634 0.26236 1.09861 0.40547 45 1.44469 0.75323 2.50659 1.55214 - c - - : 1.38629 1.38629 1.38629 1.38629 0.02223 4.51050 4.51050 1.46634 0.26236 1.09861 0.40547 46 1.21328 2.63293 0.69499 2.02623 - g - - : 1.38629 1.38629 1.38629 1.38629 0.02223 4.51050 4.51050 1.46634 0.26236 1.09861 0.40547 47 3.28911 0.39954 3.46336 1.34416 - C - - : 1.38629 1.38629 1.38629 1.38629 0.08218 4.51050 2.68975 1.46634 0.26236 1.09861 0.40547 48 1.39707 1.09368 2.32991 1.13821 - c - - : 1.38629 1.38629 1.38629 1.38629 0.02359 4.45191 4.45191 1.46634 0.26236 2.10126 0.13045 49 1.40082 1.86113 2.38286 0.68157 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02359 4.45191 4.45191 1.46634 0.26236 0.28051 1.40811 50 3.20234 1.67251 3.36614 0.30512 - U - - : 1.38629 1.38629 1.38629 1.38629 0.02223 4.51050 4.51050 1.46634 0.26236 1.09861 0.40547 51 2.34673 1.80786 1.68656 0.58850 - U - - : 1.38629 1.38629 1.38629 1.38629 0.21443 4.51050 1.70374 1.46634 0.26236 1.09861 0.40547 52 2.11277 1.16009 1.54937 1.04056 - u - - : 1.38629 1.38629 1.38629 1.38629 0.13709 4.32295 2.16413 1.46634 0.26236 2.92081 0.05540 53 1.58473 1.48171 1.47231 1.08366 - u - - : 1.38629 1.38629 1.38629 1.38629 0.02996 4.21583 4.21583 1.46634 0.26236 3.26642 0.03889 54 1.41432 2.11262 1.19097 1.10244 - u - - : 1.38629 1.38629 1.38629 1.38629 0.02996 4.21583 4.21583 1.46634 0.26236 3.26642 0.03889 55 1.33630 2.39959 0.70575 1.87934 - g - - : 1.38629 1.38629 1.38629 1.38629 0.09029 4.21583 2.63707 1.46634 0.26236 3.26642 0.03889 56 2.21788 2.39101 0.68762 1.21453 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03180 4.15734 4.15734 1.46634 0.26236 3.40340 0.03383 57 2.01083 1.03856 1.42375 1.30435 - c - - : 1.38629 1.38629 1.38629 1.38629 0.03180 4.15734 4.15734 1.46634 0.26236 3.40340 0.03383 58 2.59532 0.63531 2.73661 1.10619 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03180 4.15734 4.15734 1.46634 0.26236 3.40340 0.03383 59 2.36502 2.35662 1.72847 0.45609 - U - - : 1.38629 1.38629 1.38629 1.38629 0.10250 4.15734 2.50381 1.46634 0.26236 3.40340 0.03383 60 2.42789 1.26586 2.55987 0.59336 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03409 4.08893 4.08893 1.46634 0.26236 3.53490 0.02960 61 1.33650 2.02380 1.32250 1.08289 - u - - : 1.38629 1.38629 1.38629 1.38629 * 0.00000 * 0.45905 0.99935 0.00000 * //